Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi946g00002 ATGTATGCACACACCAACACCCCATTCTCACGCGCCGCCACAGCATCACCCCTTCCCTCCTCGCCTTCCCCATCAATGCACAACCTCTTCTCCGAACTCAGCGAGTTCGACTCGCTGCACGAGACTCTCCCCCAACTCAACAACTCGGAGGTGAGTTACAATAATAACAACAGCTGTAGCAGTGGTTATAGCAGCTATACTGGGTCACCAACTTCTCTGGTTAGTCCCACCTTTATGCAGAGGAGCGTTAGCAGCCATTCCCTTCACAGGAATGGGACCCACCACCCTCTTTCTGCTCTGTTCTCTGAGTTGTTCGACTCGGAGGACTCTCCGGTGAGGAAAGTGTACAGTACCAGTGATCTTCAGAGGATTAATGGAATACAGCGTAATCATTACTCGGATAGTCCATTGTCAAGCGAAAGCAGTATGATCATAGAAGGGATGAACAGAGCCTGCCGATATAGCCCGGAGGAGAAGAAGGTGAGAATTGAGAGATATAGAAGCAAGAGGAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCATGTAGGAAGACATTGGCAGACAGCAGGCCACGCATCAGAGGAAGGTTTGCTAGGAATGACGAAATTGACAAGAACCCTCCAATTCAGTGGAGCCACATTGGTGTTGGAGAGGAAGAAGATGTGGAATGTGAGAATTGGGTCAGTATCTTTGATTCCTTAGTTGCTGCAAATCTTGCTCAGGAGTCTCAAGACAGTTCCTCCTTTGGTCTATTGTATTAG 765 0.4797 MYAHTNTPFSRAATASPLPSSPSPSMHNLFSELSEFDSLHETLPQLNNSEVSYNNNNSCSSGYSSYTGSPTSLVSPTFMQRSVSSHSLHRNGTHHPLSALFSELFDSEDSPVRKVYSTSDLQRINGIQRNHYSDSPLSSESSMIIEGMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNPPIQWSHIGVGEEEDVECENWVSIFDSLVAANLAQESQDSSSFGLLY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi946g00002 254 MobiDBLite consensus disorder prediction 1 26 - -
Gabi946g00002 254 ProSiteProfiles CCT domain profile. 159 201 IPR010402 GO:0005515
Gabi946g00002 254 Pfam CCT motif 161 201 IPR010402 GO:0005515
Gabi946g00002 254 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 27 220 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi946g00002 Gabi-Chr946 28637 31547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi946g00002 155 206 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 5.27e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi946g00002 CCT 9.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi946g00002 - - gmx:102661609 320.857