Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi944g00016 ATGAGGAGGAATTGCAACTTGGAACTTACCCTTTTTCCTCCCTACGATTCTGATGACCACCGCCACAACCATATCATAATGGAAGAAGATAATGAGAGCCCAATGCAAAATTACCACTACCAGCAGCAGCTGCAACAGGAACAGCAACAGAAGCTGACCATTTTCTATGATGGGAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCCATCTTAATGCTTGCAAATAAAAAAGCGGAGGAAAGAGTAAGGACGCCAACCTCAACAGGGTCAGAGCCATCTTCACCAACAGTAGTGTATAGCCCTGGCCCTGGCCTTTCCATGAAAAGATCGCTGCAACGGTTCCTTCAGAAGAGAAAGATTCGGGTCCAAGAAGCATCCCCATACAATCACTAG 402 0.4627 MRRNCNLELTLFPPYDSDDHRHNHIIMEEDNESPMQNYHYQQQLQQEQQQKLTIFYDGKICVADVTELQAKSILMLANKKAEERVRTPTSTGSEPSSPTVVYSPGPGLSMKRSLQRFLQKRKIRVQEASPYNH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi944g00016 133 MobiDBLite consensus disorder prediction 80 109 - -
Gabi944g00016 133 SMART tify_2 45 79 IPR010399 -
Gabi944g00016 133 Pfam tify domain 47 78 IPR010399 -
Gabi944g00016 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 34 132 IPR040390 -
Gabi944g00016 133 Pfam Jas motif 111 131 IPR018467 -
Gabi944g00016 133 ProSiteProfiles Tify domain profile. 45 79 IPR010399 -
Gabi944g00016 133 MobiDBLite consensus disorder prediction 88 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi944g00016 Gabi-Chr944 180240 181752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi944g00016 1 131 Tify Gene Family AT1G30135 40.876 1.26e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi944g00016 tify 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi944g00016 - - gmx:100500349 162.155