Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi941g00014 ATGGAAGGTTCAAAGCCTAATCCTATGTTGGAGAGAAAAGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACAAACACTAAGTTCTGTTACTACAATAACTATAGCCTCTCTCAGCCAAGGTACTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAACGTTCCTGTTGGTGGTGGCTCAAGAAAGAACAAGAGATCCACACCATCAGCAACAACATCAACTTCATCCTCAGCTCCAATATCAACAAAGAAGCTTCCTGATCTGACAACACAGAATTTCCCTCAATCTGCTTCTCAAAACCCAAAGATCCATCAAGGCCAAGATCTTAACTTAGCATATCCACCAGCTGAGGACTACAACAGCATATCTAAATTTATTGAGGTTCCTTACAGCACTGAAGACAAGAATCATATTAATCACAACCTTCAAAACCCAAGTTCTTCTTCAACATCTTCTCATCATCAGTTGTCTGCTATGGAGCTTCTCAAAACTGGGATTACTTCTTCAAGGGGTTTAAATTCTTTCATGCCCATGTCGTTATCGGATTCAAGTACAATGTATAATTCATCTGGGTTTCCTTTGCAAGACTTTAAGCCTGGCCTTAACTTCAGTCTTGAGGGATTTGAAAATGGCTATGGTGGTCTTCAGGGAATTCAAGAGGGTGCTGGTGCAAGGATCTTGTTTCCTGTGGAGGATTTGAAGCAGCAGGTTCCAGGCACCACTGAGTTTGAACAGAATAGAAATCAAGGGGATTCAACTGTGTATTGGAATGGCATGTTAGGTGGAGGATCATGGTAG 831 0.4152 MEGSKPNPMLERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSATTSTSSSAPISTKKLPDLTTQNFPQSASQNPKIHQGQDLNLAYPPAEDYNSISKFIEVPYSTEDKNHINHNLQNPSSSSTSSHHQLSAMELLKTGITSSRGLNSFMPMSLSDSSTMYNSSGFPLQDFKPGLNFSLEGFENGYGGLQGIQEGAGARILFPVEDLKQQVPGTTEFEQNRNQGDSTVYWNGMLGGGSW 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi941g00014 276 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 171 IPR045174 GO:0003700|GO:0006355
Gabi941g00014 276 MobiDBLite consensus disorder prediction 63 116 - -
Gabi941g00014 276 MobiDBLite consensus disorder prediction 1 22 - -
Gabi941g00014 276 MobiDBLite consensus disorder prediction 71 116 - -
Gabi941g00014 276 Pfam Dof domain, zinc finger 19 76 IPR003851 GO:0003677|GO:0006355
Gabi941g00014 276 ProSitePatterns Zinc finger Dof-type signature. 24 60 IPR003851 GO:0003677|GO:0006355
Gabi941g00014 276 MobiDBLite consensus disorder prediction 1 19 - -
Gabi941g00014 276 ProSiteProfiles Zinc finger Dof-type profile. 22 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi941g00014 Gabi-Chr941 114869 116582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi941g00014 9 276 C2C2-Dof Transcription Factor Family AT3G61850 46.181 4.42e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi941g00014 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi941g00014 - - lja:Lj0g3v0363619.1 414.461