Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi93g00007 ATGGAATCGAAGAACCCTGCAAGGTTTAAGCTTGGGAAGCAGTCATCGCTGGCCCCAGAACGCCATGGTGAAGAGCAAGAGCTCCAAAACGATGGAGATGTTGTGGATCCAGGAGTGAGGCTTATGTATTCGGCCAACGAAGGCGATGTAGATGGTATCCGCGAGGTGTTGGAGTTGGGTGTGAGTGTGAATTTCAGGGATATTGATGACCGCACGGCTCTTCATATTGCAGCGTGTCAGGGCTTAACTGATGTTGTTGCTTTGTTGCTCGAGAAAGGTGCTGAGGTTGATCCTAAAGATCGATGGGGGAGCACGCCACTTGCAGATGCTATATATTATAAAAACAATGATGTGATCAAACTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAATCATGCACGTGAAGTTCCAGAATATGAAATCAATCCTAAAGAACTTGATTTTACCAACAGTGAGGAGATATCAAAGGGGACTTTCTGTAGTGCATTGTGGCGTGGGACCCAGGTTGCAGTAAAAAAGCTTGGGGAGGATGTGATTACCGATGAGGAAAAAGTGAAGGCTTTCAGGGATGAGCTTGCTCTGTTCCAGAAGATCCGGCATCCAAATGTAGTCCAGTTTCTGGGTGCTGTGACCCAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTTTTGAATAGAAAAGGAGCTTTGAAACCATCAACAGCTGTGAAATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAGAATAAGCCATCACCCATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCCGGGCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTGGCAGTTAAAGAAGTTAGGCCTCTAACTTGCCAAGAAACTTCTTGCCGCTATATAGCTCCAGAGGTTTTCAAACAAGAAGAATATGACACTAAAGTGGATGTATTCTCATTTGCACTAATTCTGCAAGAGATGATTGAAGGCTGTCCTCCTTTTTCTGCAAAAAATGAAGATGAGGTTCCTAAGGTATATGCTGCAAAAGAGCGACCGCCTTTCCTAGCTCCTGCCAAGCGTTATTCCCATGGACTTCGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACAAGACTGGAGTCCATCTACAATATAGTTGGTCAAAAAAGACGTTGGAAGGTTAGACCATTGAGATGCTTCCAGAATCTGGAAGCTTTATTGAAGAGGGATCATTCAAATGGAAGCAGTAGGAGTGGTTCATCTCGCTCCACAGCAAGCCGTATATGA 1371 0.4435 MESKNPARFKLGKQSSLAPERHGEEQELQNDGDVVDPGVRLMYSANEGDVDGIREVLELGVSVNFRDIDDRTALHIAACQGLTDVVALLLEKGAEVDPKDRWGSTPLADAIYYKNNDVIKLLEKHGAKPLMAPMHVNHAREVPEYEINPKELDFTNSEEISKGTFCSALWRGTQVAVKKLGEDVITDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFLNRKGALKPSTAVKFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEVRPLTCQETSCRYIAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKNEDEVPKVYAAKERPPFLAPAKRYSHGLRELIEECWNENPAKRPTFRQIITRLESIYNIVGQKRRWKVRPLRCFQNLEALLKRDHSNGSSRSGSSRSTASRI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi93g00007 456 SUPERFAMILY Protein kinase-like (PK-like) 142 408 IPR011009 -
Gabi93g00007 456 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Gabi93g00007 456 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Gabi93g00007 456 Gene3D - 5 145 IPR036770 -
Gabi93g00007 456 FunFam Integrin-linked protein kinase family 20 145 - -
Gabi93g00007 456 ProSiteProfiles Protein kinase domain profile. 154 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi93g00007 456 Gene3D Transferase(Phosphotransferase) domain 1 230 446 - -
Gabi93g00007 456 FunFam Os01g0748600 protein 140 427 - -
Gabi93g00007 456 MobiDBLite consensus disorder prediction 15 29 - -
Gabi93g00007 456 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Gabi93g00007 456 CDD STKc_MAP3K-like 160 407 - -
Gabi93g00007 456 SMART ANK_2a 69 98 IPR002110 GO:0005515
Gabi93g00007 456 SMART ANK_2a 102 131 IPR002110 GO:0005515
Gabi93g00007 456 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Gabi93g00007 456 SUPERFAMILY Ankyrin repeat 40 131 IPR036770 -
Gabi93g00007 456 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Gabi93g00007 456 PIRSF ILK 1 430 - -
Gabi93g00007 456 MobiDBLite consensus disorder prediction 1 32 - -
Gabi93g00007 456 PRINTS Tyrosine kinase catalytic domain signature 226 239 IPR001245 GO:0004672|GO:0006468
Gabi93g00007 456 PRINTS Tyrosine kinase catalytic domain signature 265 283 IPR001245 GO:0004672|GO:0006468
Gabi93g00007 456 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Gabi93g00007 456 Pfam Protein tyrosine and serine/threonine kinase 170 407 IPR001245 GO:0004672|GO:0006468
Gabi93g00007 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi93g00007 Gabi-Chr93 71157 80305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi93g00007 8 428 MAP Kinase Kinase Kinase AT4G18950 69.484 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gabi93g00007 PK_Tyr_Ser-Thr 6.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi93g00007 - - gmx:100790126 815.068