Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi938g00010 ATGGCAGACCCTACAGCCATCTACGACTTCCTGAAGCAGCACCCTGCAGCTTCAAAAACAAGTGCTGCAAAGAGGTTGCAGCCACAATCATCATCTTCAATCCGCACCTTCCAATGCCACTTTTGTCACCGCAAGTTCTACACTTCACAAGCTCTTGGTGGCCACCAGAATGCTCACAAGCAAGAAAGAGCAGCTGCTAGAAGAAACATTAACGCTCACAATGGTAACAACAACATGAACATGAATGTGCCACCACTTCCACCACCACCATTGGAGTCTTCTCTTAAGATCACTGAACCCATGACCATGATCACCATGCCTGAACTTGACCCTTCAGCTTCTTCTTCTTCTCCAAATGTTCGTTTCTTCCACAACCGTTCTTATTGGCTTGAAGTTGATCCCTTGCAGTTTCAGACCCATCACCATGTTCCAACCACCACCACCACCACTGTCCCTCCTTATCTTCCTTTTCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTCTTCTTTCGCTTCCATCCCTCAACAAATTTTCTCCCATAATAATGCTGCTGCTTCTTCTGCTGTTGCTGATGCTCCTGACAATGCCAACCTTGACCTCACCCTTCGCTTGTGA 618 0.479 MADPTAIYDFLKQHPAASKTSAAKRLQPQSSSSIRTFQCHFCHRKFYTSQALGGHQNAHKQERAAARRNINAHNGNNNMNMNVPPLPPPPLESSLKITEPMTMITMPELDPSASSSSPNVRFFHNRSYWLEVDPLQFQTHHHVPTTTTTTVPPYLPFLGGGGGGGGGASSFASIPQQIFSHNNAAASSAVADAPDNANLDLTLRL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi938g00010 205 SUPERFAMILY beta-beta-alpha zinc fingers 35 64 IPR036236 -
Gabi938g00010 205 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Gabi938g00010 205 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Gabi938g00010 205 Gene3D Classic Zinc Finger 16 83 - -
Gabi938g00010 205 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 119 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi938g00010 Gabi-Chr938 94634 95251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi938g00010 32 111 C2H2 Transcription Factor Family AT5G14010 47.253 1.28e-16 72.4