Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi933g00008 ATGGAGAGCACCGAATCATCCACGTGTTCGCAACAACCGAACCTGCCACCAGGTTTTCGATTCCACCCCACAGACGAGGAGCTAGTTGTTCACTACCTCAAGAAGAAGGTTGCCTCTGTTCCTCTCCCTGTTGCCATCATAGCTGAGGTCGATCTCTACAAATTTGATCCATGGGAGCTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTTAGCCCAAGGGATAGGAAGTACCCTAACGGAGCAAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAAGCCACAGGGACAGATAAGCCTGTGTTGTCCTCTGCTGGAACTCATAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGAGGAAAACCACCAAGAGGGATTAAGACAAGTTGGATCATGCATGAGTACCGTATTGCTGATAACAAGCCTAATAATAAGCCTCCTGGTTTTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGTTATGCCGGATCTACAAGAAGGGCAATACACACAGGTCGAATGTAGATCGTGACAGGGATGATAATTCCATGGATGACGTGATTGGAAGGGTACCTCCTTCAATCAACGTGGGCCACATGAATGCGAGACTTCACCTTTCAAAGATGTCCACAAACTCCTACAGTGGCGCATTGTTAGAAAATGATCAAAATTTGTTGGATGGTGTGGTTATAGGCAATGATGGAATCAGCACAACAAGTGCTATATCATATCATTTGGGCCTCTCAAACTCCAATTCAAACACTTCAGCTTCCAAAAGAACACTATCATCACTGTATTGGAATGATGAGGATGTGGCTGGTACCTCATTATCTAACAAACAGTTTAATTTAGAGAGTACTATGAATGGTGGCAGTGTTGTGAGGACAGAAGAGAATGGCTCTATTGCCACTCTGCTTAACCAGCTTCCACAAACACCTTCATTGCACCAACAAACAATGCTGGGGCCTATAGGAGATGGGTTACTTCGATCACCATATCAAATACAAGGGATGAATTGGTATGGTTAG 1059 0.4476 MESTESSTCSQQPNLPPGFRFHPTDEELVVHYLKKKVASVPLPVAIIAEVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSAGTHKVGVKKSLVFYGGKPPRGIKTSWIMHEYRIADNKPNNKPPGFCDLGNKKNSLRLDDWVLCRIYKKGNTHRSNVDRDRDDNSMDDVIGRVPPSINVGHMNARLHLSKMSTNSYSGALLENDQNLLDGVVIGNDGISTTSAISYHLGLSNSNSNTSASKRTLSSLYWNDEDVAGTSLSNKQFNLESTMNGGSVVRTEENGSIATLLNQLPQTPSLHQQTMLGPIGDGLLRSPYQIQGMNWYG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi933g00008 352 MobiDBLite consensus disorder prediction 1 20 - -
Gabi933g00008 352 MobiDBLite consensus disorder prediction 1 17 - -
Gabi933g00008 352 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Gabi933g00008 352 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Gabi933g00008 352 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Gabi933g00008 352 PANTHER NAC TRANSCRIPTION FACTOR 56 15 221 - -
Gabi933g00008 352 FunFam NAC transcription factor 56 24 182 - -
Gabi933g00008 352 SUPERFAMILY NAC domain 7 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi933g00008 Gabi-Chr933 175587 177360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi933g00008 1 351 NAC Transcription Factor Family AT3G15510 51.733 4.94e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi933g00008 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi933g00008 - - gmx:100784578 545.814