Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi933g00007 ATGAAGCAGTTGATCCGCAAGCTCTCCCGAGTCGCCGACTCGTCGCAGTACACTCTCCTCCGGTTTGAGTCCCGCAGGGAGCGCGGCACGGCGGTTCCAAAGGGCCACGTGCCGGTCTATGTGGGCGAGGAGATGGAGCGGTTCGTGGTGAACGCCGAGCTGCTGAACCACCCGGTTTTCGTGAAGCTCCTGAACCGGTCGGCTCAGGAGTACGGTTACGAGCAGAAGGGCGTGCTACGAATCCCCTGCCACGTCATCGTCTTCGAGCGAGTCCTCGAAGCGCTTCGACTTGGCCACGACTCGGGCGATCTCCGCGTCATCCTCAGTTCCTCTCCTGAAGAGTTTTGCTAG 351 0.6125 MKQLIRKLSRVADSSQYTLLRFESRRERGTAVPKGHVPVYVGEEMERFVVNAELLNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVIVFERVLEALRLGHDSGDLRVILSSSPEEFC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi933g00007 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 91 IPR003676 GO:0009733
Gabi933g00007 116 Pfam Auxin responsive protein 7 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi933g00007 Gabi-Chr933 88493 88948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi933g00007 30 95 Calmodulin-binding Proteins AT2G24400 48.485 3.59e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi933g00007 K14488 - oeu:111370706 171.014