Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi930g00006 ATGACTCAGTGCAGTGACCCTGAAAACAATCATAACATCATAGTAGAGGGACGAAAGGACAGCACAATAAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAACAGGGTGGTGGAATTCATGACTTACCTGGGCTTCCTGCTGGAGTGAAGTTTGATCCCACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTTCGCTCTGATATTCATAAGCTTCACCCGCTAATTGATGAGTTTATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGGGTTAGCAAAGATGGCCAGATCCGCCATTTCTTTCATCGGCCTTCAAAGGCATATACAACAGGAACAAGGAAAAGGAGAAAGGTGCACTCAGATGAGGATGGTAGTGAAACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTGTATAACAGTGCAAAGTTGAAAGGGTACAAGAAAATTCTTGTACTTTACACTAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCACCAGTACCACCTTGGCGATGATGAAGAGGAGAAGGAAGGGGAGCTAGTAGTCTCCAAAGTTTTCTATCAAACACAACCTAGACAATGTGGTTCATTGATGAAAGACTCATCAGTTCCTGAAAAACTTATGAAGGGTCAAAGTATGCATGAGGTAATCAATAACAAAAACAATGGTTTTGTTGAGTACTACCATTCAAATTTCATATCATTTGATCAAGGGAGCCAGCATAGATCTAACAGTGCTCAAGTAATTTCCCATTTTCCTGTCCATGATGGTGCTCCTTTCATTCCTTGA 846 0.4149 MTQCSDPENNHNIIVEGRKDSTIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGDDEEEKEGELVVSKVFYQTQPRQCGSLMKDSSVPEKLMKGQSMHEVINNKNNGFVEYYHSNFISFDQGSQHRSNSAQVISHFPVHDGAPFIP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi930g00006 281 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Gabi930g00006 281 MobiDBLite consensus disorder prediction 122 147 - -
Gabi930g00006 281 FunFam NAC domain-containing protein 73 57 211 - -
Gabi930g00006 281 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 21 232 IPR044799 GO:0003700
Gabi930g00006 281 MobiDBLite consensus disorder prediction 127 146 - -
Gabi930g00006 281 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Gabi930g00006 281 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Gabi930g00006 281 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi930g00006 Gabi-Chr930 90426 92242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi930g00006 24 281 NAC Transcription Factor Family AT4G28500 62.857 1.27e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi930g00006 NAM 5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi930g00006 - - gmx:100797459 542.732