Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi929g00013 ATGGAGGACCAGAACCTTACACTCATTCAGTCTCTGAATTCATCACCCATTACAAACGAGGAAGTGATGCACACCGTTTCCGACAACAACAATAGCAACAACGCCGTACCAGATGCTGTCGGACTTGATTCTGCCTCGGACACGGTGGCAAAGTCCGAGGCTGTTGGTTCGGGACAGCCTGTGAAGAGGGGAAGGGGGAGGCCTCGGAAGTACGATGGTGATGGGAAAATCTTGTCTCTGAAGTCGGAGCCACCAGCCATTTCCACTTACCCTTTTGGAAGTTCTGTCAAGAGAAGTCGAGGACGGCCTCCTGGTTCCGGAAAACTGCAGATTCTGGCTTCCATTGGTGGGTTTGTTGCAGAAACAGCTGGGGGAAGCTTCACACCTCATGTGCTAGTTGTGGACCCTGGAGATGATGTAGTAAGCATGATATTATCATTTTTTCAGAAAGGGCCTCTTGCAGTTTGCATACTTTCTGCCACCGGTGCTGTATCAAGTGTCAGTATTCGCCAAGCAGGTGTTGCTGGTGGTGTTTTGAGCTATGAGCTTGTTATGGCCACTTTCAAGCAAAACATAAGTAAGCAAATCAAGAGAAGGTGCTTATCTGGATCTTCTACTGCTCCCAATATGCCGGGTAATCCAGATTCAGTGAGGGTCGACCTGAAAGTTCCTAAGTTGATTGAAGGTGAACGGAGTTTCCCTTCACCAACATCAGGACTTAGGCCAACAGCAACAACTAATGTAGAACCAGATCATGTCATTCCAGCAACAACTAATGAATTAGCAGATAATGTTATTCCACCAACAACTAATGAAGTGCCTGATAATGTCATTGCTGCAACAACTAATGAAGTGTCAGATAATATCATTGCTGCAGATAACGATATGCACTCTGCCTCTGTTAATTGTGGTGGTGACATGAACTGCCAGACCCTGAAGCCCATCAAAGACCAAAGAATGTCTGAATATGTCGATGCCAGTGTCCCTCAGATATAA 996 0.4639 MEDQNLTLIQSLNSSPITNEEVMHTVSDNNNSNNAVPDAVGLDSASDTVAKSEAVGSGQPVKRGRGRPRKYDGDGKILSLKSEPPAISTYPFGSSVKRSRGRPPGSGKLQILASIGGFVAETAGGSFTPHVLVVDPGDDVVSMILSFFQKGPLAVCILSATGAVSSVSIRQAGVAGGVLSYELVMATFKQNISKQIKRRCLSGSSTAPNMPGNPDSVRVDLKVPKLIEGERSFPSPTSGLRPTATTNVEPDHVIPATTNELADNVIPPTTNEVPDNVIAATTNEVSDNIIAADNDMHSASVNCGGDMNCQTLKPIKDQRMSEYVDASVPQI 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi929g00013 331 SMART AT_hook_2 62 74 IPR017956 GO:0003677
Gabi929g00013 331 SMART AT_hook_2 97 109 IPR017956 GO:0003677
Gabi929g00013 331 Gene3D - 129 207 - -
Gabi929g00013 331 MobiDBLite consensus disorder prediction 44 84 - -
Gabi929g00013 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 170 IPR005175 -
Gabi929g00013 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 177 - -
Gabi929g00013 331 PRINTS AT-hook-like domain signature 62 72 IPR017956 GO:0003677
Gabi929g00013 331 PRINTS AT-hook-like domain signature 95 106 IPR017956 GO:0003677
Gabi929g00013 331 CDD DUF296 128 173 IPR005175 -
Gabi929g00013 331 ProSiteProfiles PPC domain profile profile. 124 269 IPR005175 -
Gabi929g00013 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 182 IPR039605 GO:0003680
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi929g00013 Gabi-Chr929 164509 173030 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi929g00013 61 182 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.820 6.61e-31 117
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi929g00013 - - gsj:114378162 244.202