Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi927g00013 ATGGTGGATAGTGCTCCAAACATGCAGCTAACAATGGTTTCAAGCTTGGTTATGATCATTCTGTCTATTTCATCATTGGGCTCAGCAACACTGCAGGTGGGTTTCTATAGCTCCACATGTCCATCTGCTGAGGCAATTGTCAGAAGAGCAGTCAACAAAGCAATTTCTCTCAACCCTGGAATAGGTGCTGGTCTTATTAGAACGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCAGTGTTACTTGCATCCACACCCGGTAACCCACCTGCTGAGAGAGACAACTTCATAAACAATCCAAGCTTACGTGGGTTTGAAGTGATTGAGGATGCTAAGTCCCAATTGGAGTCAGCATGTCCTCACACAGTCTCATGTGCTGACATTATCGCCTTTGCAGCTCGAGACTCAGCCCTCAAACTTGGTGGCATTAACTACGACGTTCCATCAGGACGCAGAGATGGTCGCGTCTCCATCGGTGATGAAGTGCCACAAAATCTACCAGCACCAACCTTCAATGTTGATCAACTTGTTGGCAATTTTGCAAGAAAAGGGTTGTCAGCAGAAGAAATGGTGACACTTTCAGGAGCCCATTCAATTGGTGTATCACACTGTTCTTCTTTCTCTAAACGCCTGTACTCATTCAATGACACAAATGCTCAAGATCCCTCGATGGATCCTTCATATGCTGCATGGTTGAAAACAAAGTGTCCGCAACCAGCGAGCAACACAGACCCAACGGTGGCACTTGATGCAGCAACGCCAATTCGATTGGACAACAAGTACTATAAGGGAGTGATAAACCATCGTGGGTTGTTGACATCGGATCAGACATTGTGGAGCAGCGAATCAACAAGGCAAATGGTTATAAGCAATGCTAATTATAATCATAATTATAATTATAATAATAATAATAATGGAGCAAGTAATTGGGCTGTGAAGTTTGCAAAGGCAATGGTCCACATGGGTTCTATAGATGTGCTTACTGGCTCTGATGGTGAGATCAGGACAGATTGCAGCTTTGTTAATCGACAATAG 1041 0.4409 MVDSAPNMQLTMVSSLVMIILSISSLGSATLQVGFYSSTCPSAEAIVRRAVNKAISLNPGIGAGLIRTHFHDCFVRGCDGSVLLASTPGNPPAERDNFINNPSLRGFEVIEDAKSQLESACPHTVSCADIIAFAARDSALKLGGINYDVPSGRRDGRVSIGDEVPQNLPAPTFNVDQLVGNFARKGLSAEEMVTLSGAHSIGVSHCSSFSKRLYSFNDTNAQDPSMDPSYAAWLKTKCPQPASNTDPTVALDAATPIRLDNKYYKGVINHRGLLTSDQTLWSSESTRQMVISNANYNHNYNYNNNNNGASNWAVKFAKAMVHMGSIDVLTGSDGEIRTDCSFVNRQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi927g00013 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Gabi927g00013 346 Gene3D - 34 344 - -
Gabi927g00013 346 Pfam Peroxidase 47 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 SUPERFAMILY Heme-dependent peroxidases 31 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 Gene3D Peroxidase, domain 2 169 323 - -
Gabi927g00013 346 FunFam Peroxidase 169 323 - -
Gabi927g00013 346 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 ProSiteProfiles Plant heme peroxidase family profile. 30 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 CDD secretory_peroxidase 31 343 IPR033905 GO:0004601|GO:0042744
Gabi927g00013 346 PANTHER PEROXIDASE 25-RELATED 20 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00013 346 FunFam Peroxidase 34 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi927g00013 Gabi-Chr927 166671 167827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi927g00013 16 344 Peroxidase AT4G11290 44.277 4.25e-90 271