Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi927g00009 ATGGATAGTGCTCCACATATGCACCTAATAATGGTTTCTAGCTTGGTTCTGATCATTCTATGTATTTCATCATTGGCCTCAGCAACTCTGCAGGTGGGTTTCTATAGCTCCACATGTCCATCTGCTGAGGCAATTGTCAGAAGCGCAGTCAACAAAGCAGTTTCTGTGAACCCGGGTTTTGGTGCTGGTCTTATTAGAATGCATTTCCATGATTGCTTTGTGAGGGGTTGTGATGGTTCAGTGTTACTTGCATCCACACCCGGTAACCCACCTGCTGAGAGAGACAACTTCATAAACAATCCAAGCTTACGTGGGTTTGAAGTGATTGAGGATGCTAAGTCCCAATTAGAGTCAGCATGTCCTCACACAGTCTCATGTGCTGACATTATCGCCTTTGCAGCTCGAGACTCTGCTCTCAAACTTGGTGGCATTAACTACGACGTTCCATCAGGACGCAGAGATGGTCGTGTCTCCATCGGTGATGAAGTGCCACAAAATGTACCAGCACCAACCTTCAATGTTGATCAACTTGTTGCCAATTTTGCAAGAAAAGGGTTGTCAGCAGAAGAAATGGTGACACTTTCAGGAGCCCATTCAATTGGTGTATCACACTGTTCTTCTTTCTCTAAACGCCTGTACTCATTCAATGACACAAATGCTCAAGATCCTTCGATGGATCCTTCATATGCTGCATGGTTGAAAACAAAGTGTCCGCAACCAGCGAGCAACACAGACCCAACGGTGGCACTTGATGCAGCCACGCCAATTCGATTGGACAACAAGTACTATAAGGGAGTGATAAACCATCGTGGGTTGTTGACATCGGATCAGACATTGTGGAGCAGCGAATCAACAAAGGAAATGGTTATAAGCAATGCTAATTATAATCATAATTATAATTATAATTATAATAATAATAACGGAGCAAGTAATTGGGCTGTGAAGTTTGCAAAGGCAATGGTCCACATGGGTTCTATAGATGTTCTTACGGGCTCAGATGGCGAGATTAGGACAGATTGCAGCTTTGTTAATCAACAATAG 1041 0.4361 MDSAPHMHLIMVSSLVLIILCISSLASATLQVGFYSSTCPSAEAIVRSAVNKAVSVNPGFGAGLIRMHFHDCFVRGCDGSVLLASTPGNPPAERDNFINNPSLRGFEVIEDAKSQLESACPHTVSCADIIAFAARDSALKLGGINYDVPSGRRDGRVSIGDEVPQNVPAPTFNVDQLVANFARKGLSAEEMVTLSGAHSIGVSHCSSFSKRLYSFNDTNAQDPSMDPSYAAWLKTKCPQPASNTDPTVALDAATPIRLDNKYYKGVINHRGLLTSDQTLWSSESTKEMVISNANYNHNYNYNYNNNNGASNWAVKFAKAMVHMGSIDVLTGSDGEIRTDCSFVNQQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi927g00009 346 Pfam Peroxidase 46 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 FunFam Peroxidase 168 323 - -
Gabi927g00009 346 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gabi927g00009 346 CDD secretory_peroxidase 30 343 IPR033905 GO:0004601|GO:0042744
Gabi927g00009 346 ProSiteProfiles Plant heme peroxidase family profile. 29 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 Gene3D Peroxidase, domain 2 168 323 - -
Gabi927g00009 346 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 Gene3D - 33 344 - -
Gabi927g00009 346 PANTHER PEROXIDASE 25-RELATED 21 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 SUPERFAMILY Heme-dependent peroxidases 30 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi927g00009 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Gabi927g00009 346 FunFam Peroxidase 33 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi927g00009 Gabi-Chr927 103028 104184 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi927g00009 15 344 Peroxidase AT4G11290 44.444 1.93e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi927g00009 K00430 - gmx:100786791 493.812