Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi927g00003 ATGGCAGAGGAGTTGATTTTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGTAAGGATAGCACTGGCTGAAAAAGATACAAAGTATGAGTACAAGGAAGAGGATCTCATGAATAAGAGCCAGCTACTTCAGAAAATGAACCCAATTCACAAGAAGATCCCAGTTCTCATCCATAACGGGAAACCCATATGCGAGTCCATCATTATTGTTGAGTATATTGATGAGGTCTGGAACGATAAAGCTCCTCCGTTGCTACCCTCAGATCCTTATCAGAGAGCTCAAGCAAGGTTCTGGGCTGATTTTGTTAACAAGAAGGTTGGTGATGTTGGGGGGAGAATATGGGCAGGAAAGCGAGATGAGATCGAAGTGGCAAAGAAGGACTTAATGGAGGGCCTAAAAGAATTGGAAGAGGTTCTTGGAGACAAGGCTTATTTTGGGGGTGACACATTTGGGTTTGTTGACATTGCTCTGATCCCTTTCTATAGCTGGTTTTATACTTATGAGGCATTAGGCAACTTCAAAGTGGAGGCAGAGTGTCCTAAGTTAATTACTTGGGCAAAGAGATGCAAGCAGAGGGAGAGCGTTTCCAAATCTGTAGCTGATGAGAAGGAGATCTACGAGTTTGTTGTTAACTACAGGAAAAGTCTTGAGTTGGACTGA 663 0.4284 MAEELILLDEWLSMFGMRVRIALAEKDTKYEYKEEDLMNKSQLLQKMNPIHKKIPVLIHNGKPICESIIIVEYIDEVWNDKAPPLLPSDPYQRAQARFWADFVNKKVGDVGGRIWAGKRDEIEVAKKDLMEGLKELEEVLGDKAYFGGDTFGFVDIALIPFYSWFYTYEALGNFKVEAECPKLITWAKRCKQRESVSKSVADEKEIYEFVVNYRKSLELD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi927g00003 220 Gene3D Glutaredoxin 1 88 - -
Gabi927g00003 220 FunFam Glutathione S-transferase U20 89 220 - -
Gabi927g00003 220 SFLD Main (cytGST) 2 217 - -
Gabi927g00003 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Gabi927g00003 220 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Gabi927g00003 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Gabi927g00003 220 CDD GST_C_Tau 90 210 IPR045074 GO:0004364|GO:0006749
Gabi927g00003 220 CDD GST_N_Tau 5 78 - -
Gabi927g00003 220 Gene3D - 89 220 - -
Gabi927g00003 220 Pfam Glutathione S-transferase, C-terminal domain 122 189 - -
Gabi927g00003 220 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Gabi927g00003 220 Coils Coil 119 139 - -
Gabi927g00003 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi927g00003 220 FunFam Tau class glutathione S-transferase 1 86 - -
Gabi927g00003 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Gabi927g00003 220 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi927g00003 Gabi-Chr927 39784 41122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi927g00003 1 220 Glutathione S-transferase Gene Family AT1G17180 63.182 1.65e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi927g00003 K00799 - mnt:21386513 317.775