Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi927g00002 ATGGCAGAGGAGTTGATTTTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGTAAGGATAGCACTGGCTGAAAAAGATACAAAGTATGAGTACAAGGAAGAGGATCTCATGAATAAGAGCCAGCTACTTCAGAAAATGAACCCAATTCACAAGAAGATCCCAGTTCTCATCCATAAAGATCCTTATCAGAGAGCTCAAGCAAGGTTCTGGGCTGATTTTGTTAACAAGAAGGTTGGTGATGTTGGGGGGAGAATATGGGCAGGAAAGCGAGATGAGATCGAAGTGGCAAAGAAGGACTTAATGGAGGGCCTAAAAGAATTGGAAGAGGTTCTTGGAGACAAGGCTTATTTTGGGGGTGACACATTTGGGTTTGTTGACATTGCTCTGATCCCTTTCTATAGCTGGTTTTATACTTATGAGGCATTAGGCAACTTCAAAGTGGAGGCAGAGTGTCCTAAGTTAATTACTTGGGCAAAGAGATGCAAGCAGAGGGAGAGCGTTTCCAAATCTGTAGCTGATGAGAAGGAGATCTACGAGTTTGTTGTTAACTACAGGAAAAGTCTTGAGTTGGACTGA 579 0.4231 MAEELILLDEWLSMFGMRVRIALAEKDTKYEYKEEDLMNKSQLLQKMNPIHKKIPVLIHKDPYQRAQARFWADFVNKKVGDVGGRIWAGKRDEIEVAKKDLMEGLKELEEVLGDKAYFGGDTFGFVDIALIPFYSWFYTYEALGNFKVEAECPKLITWAKRCKQRESVSKSVADEKEIYEFVVNYRKSLELD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi927g00002 192 Pfam Glutathione S-transferase, N-terminal domain 4 61 IPR004045 -
Gabi927g00002 192 Coils Coil 91 111 - -
Gabi927g00002 192 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 61 185 IPR010987 -
Gabi927g00002 192 SUPERFAMILY Thioredoxin-like 5 61 IPR036249 -
Gabi927g00002 192 Gene3D Glutaredoxin 1 64 - -
Gabi927g00002 192 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Gabi927g00002 192 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 180 IPR045073 -
Gabi927g00002 192 FunFam Glutathione S-transferase U20 61 192 - -
Gabi927g00002 192 Pfam Glutathione S-transferase, C-terminal domain 94 161 - -
Gabi927g00002 192 Gene3D - 65 192 - -
Gabi927g00002 192 SUPERFAMILY GST C-terminal domain-like 55 187 IPR036282 -
Gabi927g00002 192 CDD GST_C_Tau 62 182 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi927g00002 Gabi-Chr927 39784 41122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi927g00002 1 192 Glutathione S-transferase Gene Family AT1G17180 54.338 7.09e-80 235