Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi926g00028 ATGGCTTTGACAATGGAGGTTTTGAGCTTCAGAAAAATGATGATGATCATTGTCATGATCATGATGATTGGAAACATGGCACAATCTGAGCTTCACCATGTTGGAGGGAACAAGATTAGTTGGTCACCCAAAGTTAACTTGTCAGAATGGTCAAGTCATGAGAACTTTCACGTGGACGACTGGCTATACTTTGGATATGATAGGTACATGTACAATGTGCTGGAGGTGAACGAGACTAGCTACAAAAACTGCATGGAGACAAATTTCATTAAGAATGTAACTGGGGGCGCAGGAAGGGACGTGTTTCACCTGCAAGAGGCCAAGACCTATTACTTCTTAAGTAGAGGAGGTTTCTGTTTGAAGGGAATGAAAGTTGCCATAAATGTTACTGAAAATATTGCAGCCACTCAACCACCTGTTCCACCAAAAAATAATGCTTCAGATGCTCGTGGCATTCAGTCATTGTGTCATGGGAGGCTGAACTAG 486 0.4218 MALTMEVLSFRKMMMIIVMIMMIGNMAQSELHHVGGNKISWSPKVNLSEWSSHENFHVDDWLYFGYDRYMYNVLEVNETSYKNCMETNFIKNVTGGAGRDVFHLQEAKTYYFLSRGGFCLKGMKVAINVTENIAATQPPVPPKNNASDARGIQSLCHGRLN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi926g00028 161 Gene3D - 29 135 IPR008972 -
Gabi926g00028 161 FunFam Lamin-like protein 28 132 - -
Gabi926g00028 161 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Gabi926g00028 161 ProSiteProfiles Phytocyanin domain profile. 30 131 IPR003245 GO:0009055
Gabi926g00028 161 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Gabi926g00028 161 PANTHER BLUE COPPER PROTEIN 23 132 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi926g00028 Gabi-Chr926 176673 178307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi926g00028 13 149 Phytocyanin Superfamily AT2G27035 42.759 4.12e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi926g00028 - - gmx:100812113 193.356