Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi926g00017 ATGGGGATTCAGACAATGGGTTCTCAAAGTAATGGGCAGCAGTCTCATTTACATCATTCTCAGTTAGCTAAGCAAAACTCGTGGTATGGTTTCACTCTTGATGAGGTTAAAAGTCTACTAGGAGACATGGGGAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCAAACAAAATCGTAGGGATAGAGAATGAGCAGGTGTCATCATCATCATCATCTTCTCTTCAACGCCAGGCTAGTCTGACCTTGGCTCGTGCTTTGAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATCCAACAAGGCCAGAAGAAACGATACGGAGACGATGTAAATATTCAGGATAGAGAAATGACTCTTGGCAAAACAACATTGGAGGACTTCTTAGTACAGGCAGGGCTTTTTGCTGAAGCTTCTATAAGTCCAACTGTGGTGTTGGATGCAATGGACGCCACCACCCCTCAAAGTTTTCAACAAAAAACAGGCTTGTCACCCTCCCCTTCAATTAGCAGTTTATCAGACACTAGACCAGGTCGCAAAAGGGATGATCCAGATGCATATGAAAAGGCTCTGGAAAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCACGTTCAAGGGCAAGAAAACAGGCTTACCATAATGAACTGGTTAGCAAGGTTTCTCGACTAGAACAAGAAAATATAACGCTCAAGAAAGAGAAGGAGTTTGAGCAGAAACTACCATCTGAATCATCACCTGAACCAAAATATCAGCTTCGAAGAATAAATTCCGCTTCCTTTTGA 816 0.4326 MGIQTMGSQSNGQQSHLHHSQLAKQNSWYGFTLDEVKSLLGDMGKPLGSMNLDELLQNVWTAEANKIVGIENEQVSSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGDDVNIQDREMTLGKTTLEDFLVQAGLFAEASISPTVVLDAMDATTPQSFQQKTGLSPSPSISSLSDTRPGRKRDDPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEQENITLKKEKEFEQKLPSESSPEPKYQLRRINSASF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi926g00017 271 MobiDBLite consensus disorder prediction 183 207 - -
Gabi926g00017 271 CDD bZIP_plant_BZIP46 201 250 - -
Gabi926g00017 271 SUPERFAMILY Leucine zipper domain 201 249 IPR046347 GO:0003700|GO:0006355
Gabi926g00017 271 MobiDBLite consensus disorder prediction 164 182 - -
Gabi926g00017 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Gabi926g00017 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 268 IPR043452 GO:0003700|GO:0045893
Gabi926g00017 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Gabi926g00017 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Gabi926g00017 271 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 251 - -
Gabi926g00017 271 Coils Coil 224 251 - -
Gabi926g00017 271 Gene3D - 199 251 - -
Gabi926g00017 271 MobiDBLite consensus disorder prediction 164 225 - -
Gabi926g00017 271 MobiDBLite consensus disorder prediction 244 271 - -
Gabi926g00017 271 Pfam bZIP transcription factor 201 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi926g00017 Gabi-Chr926 114633 119128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi926g00017 22 271 bZIP Transcription Factor Family AT3G56850 44.211 6.85e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi926g00017 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi926g00017 K14432 - gmx:100798549 408.297