Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi926g00016 ATGGGGATTCAGACAATGGGTTCTCAAAGTAATGGGCAGCAGTCTCATTTACATCATTCTCAGTTAGCTAAGCAAAACTCGTGGTATGGTTTCACTCTTGATGAGGTTAAAAGTCTACTAGGAGACATGGGGAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCAAACAAAATCGTAGGGATAGAGAATGAGCAGGTGTCATCATCATCATCATCTTCTCTTCAACGCCAGGCTAGTCTGACCTTGGCTCGTGCTTTGAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATCCAACAAGGCCAGAAGAAACGATACGGAGACGATGTAAATATTCAGGATAGAGAAATGACTCTTGGCAAAACAACATTGGAGGACTTCTTAGTACAGGCAGGGCTTTTTGCTGAAGCTTCTATAAGTCCAACTGTGGTGTTGGATGCAATGGACGCCACCACCCCTCAAAGTTTTCAACAAAAAACAGGCTTGTCACCCTCCCCTTCAATTAGCAGTTTATCAGACACTAGACCAGGTCGCAAAAGGGATGATCCAGATGCATATGAAAAGGCTCTGGAAAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCACGTTCAAGGGCAAGAAAACAGGCTTACCATAATGAACTGGTTAGCAAGGTTTCTCGACTAGAACAAGAAAATATAACGCTCAAGAAAGAGAAGTATCTTTCATAG 747 0.4351 MGIQTMGSQSNGQQSHLHHSQLAKQNSWYGFTLDEVKSLLGDMGKPLGSMNLDELLQNVWTAEANKIVGIENEQVSSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGDDVNIQDREMTLGKTTLEDFLVQAGLFAEASISPTVVLDAMDATTPQSFQQKTGLSPSPSISSLSDTRPGRKRDDPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEQENITLKKEKYLS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi926g00016 248 SMART brlzneu 197 248 IPR004827 GO:0003700|GO:0006355
Gabi926g00016 248 Pfam bZIP transcription factor 201 244 IPR004827 GO:0003700|GO:0006355
Gabi926g00016 248 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 244 IPR043452 GO:0003700|GO:0045893
Gabi926g00016 248 MobiDBLite consensus disorder prediction 183 207 - -
Gabi926g00016 248 Gene3D - 199 247 - -
Gabi926g00016 248 CDD bZIP_plant_BZIP46 201 243 - -
Gabi926g00016 248 MobiDBLite consensus disorder prediction 164 182 - -
Gabi926g00016 248 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Gabi926g00016 248 Coils Coil 224 244 - -
Gabi926g00016 248 MobiDBLite consensus disorder prediction 164 222 - -
Gabi926g00016 248 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Gabi926g00016 248 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 248 - -
Gabi926g00016 248 SUPERFAMILY Leucine zipper domain 201 244 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi926g00016 Gabi-Chr926 114395 119128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi926g00016 22 245 bZIP Transcription Factor Family AT3G56850 42.857 4.25e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi926g00016 bZIP_1 3.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi926g00016 K14432 - gmx:100798549 379.793