Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi923g00024 ATGGCGAACCGGTGGTGGACCGGCTCTGAGGGTCTCGGCGGGGTCGATGACTCTGGGAACGCGAACTCTTCATCCATGAAGAAACCGGATCTGGGTTTCTCCATGAACAACACTTTGGTGAATGAAGAAGAGGAGAAAGAAAACAGTGATGATCCCAAAGAGGGAGCTATTGAACTCTCCACCACGCGCCGCCCAAGGGGCCGTCCATCGGGCTCGAAGAACAAGCCTAAACCACCGATATTTGTGACCAGGGACAGCCCTAATGCACTCCGAAGCCATGTCATGGAGATAGCAAACGGAGCTGACATCGCCGATTGCGTGGTTCAGTTCTCCAGAAGGCGCCAAAGAGGTGTTTGCGTTTTAAGCGGCAGCGGCACCGTCGTCAACGTCACTCTACGGCAGCCGACGGTGCCCGGCGCTGTGATGGCACTTCCTGGCCGGTTCGATATCCTGTCGTTAACCGGTTCATTCCTGCCTGGACCGTCCCCACAGGGCGCCAGCGGTTTAACCATTTACCTAGCCCGAGGTCAAGGACAGGTTGTCGGCGGCGGGGTGGTGGGTCCGCTGATGGCGGCTGGACCGGTTATGATAATGGCGGCTACGTTTTCTAATGCAACCTATGAGAGATTACCGGTGGCGGATGATGATCAAGAAGGTCAGGGACAAGATGGTGTTTGCTCGCCGCCGGGGATGGGTGGCAGTGGCGGAGGAGTTTCCATCGGAGAAGCCTCATCATCGATTCCGATGTATATTAATAATATGGCTCCGAATTTGGCTCTTCAAAATGGGCAACAGCTGAAGCATGAAGCTTATTCTTCTTGGGGCAGGCCTCCCTACTAA 840 0.5524 MANRWWTGSEGLGGVDDSGNANSSSMKKPDLGFSMNNTLVNEEEEKENSDDPKEGAIELSTTRRPRGRPSGSKNKPKPPIFVTRDSPNALRSHVMEIANGADIADCVVQFSRRRQRGVCVLSGSGTVVNVTLRQPTVPGAVMALPGRFDILSLTGSFLPGPSPQGASGLTIYLARGQGQVVGGGVVGPLMAAGPVMIMAATFSNATYERLPVADDDQEGQGQDGVCSPPGMGGSGGGVSIGEASSSIPMYINNMAPNLALQNGQQLKHEAYSSWGRPPY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi923g00024 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 204 IPR005175 -
Gabi923g00024 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 246 IPR014476 GO:0003680
Gabi923g00024 279 PIRSF ESCAROLA 10 278 IPR014476 GO:0003680
Gabi923g00024 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 213 - -
Gabi923g00024 279 Gene3D - 90 218 - -
Gabi923g00024 279 MobiDBLite consensus disorder prediction 16 39 - -
Gabi923g00024 279 MobiDBLite consensus disorder prediction 1 87 - -
Gabi923g00024 279 CDD DUF296 91 175 IPR005175 -
Gabi923g00024 279 ProSiteProfiles PPC domain profile profile. 87 226 IPR005175 -
Gabi923g00024 279 MobiDBLite consensus disorder prediction 214 236 - -
Gabi923g00024 279 FunFam AT-hook motif nuclear-localized protein 90 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi923g00024 Gabi-Chr923 154125 154964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi923g00024 1 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.164 7.04e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi923g00024 - - gmx:100797639 366.311