Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi923g00015 ATGGAAGAAACAGTTGTGGATGACATAATCAGTCGCTTACTCGAAGTTCGTGGCCGTCCAGGGAAGCAGGTGCAGCTGTCGGAATCGGAGATCCGCCAGCTCTGTGCGGCTTCCAGAGATATTTTCTTGCAGCAACCTAATTTATTGGAGCTTGAAGCACCCATTAAGATTTGTGGTGATGTGCATGGTCAATATTCTGATCTTTTAAGGCTTTTTGAGTATGGTGGATTACCTCCTGAGGCCAACTACTTGTTTTTGGGGGATTATGTGGATCGAGGGAAGCAGAGTTTAGAAACAATATGCCTTCTCCTAGCTTATAAGATAAAATATCCTGAGAACTTTTTCCTTTTAAGGGGAAACCATGAATGTGCTTCTATAAACCGTATATATGGATTTTATGATGAGTGTAAAAGGAGGTTTAATGTAAGGTTATGGAAGACATTTACAGAGAGCTTCAATTGCCTGCCTGTGGCAGCTCTCATTGATGAAAAGATTTTGTGTTTGCTTTGTGATATCCTTTGGTCAGACCCAATCAAAGATGTTCAAGGTTGGAGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAACATGATTTGGATCTTATTTGTCGTGCTCATCAGGTGGTGGAGGATGGATATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCTGCACCTAATTATTGTGGGGAGTTTGACAATGCCGGGGCTATGATGAGTGTTGATGAGACACTAATGTGCTCTTTCCAAATACTAAAGCCAGCTGATAAAAAAGCAAAGCTCAATTTCGGAAGTACAACCACTGCTAAGCCAGGAAACTCTCCAGCAGGGGTAAAGTCCTTCCTGGGTACAAAAGTATGA 897 0.4158 MEETVVDDIISRLLEVRGRPGKQVQLSESEIRQLCAASRDIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTESFNCLPVAALIDEKILCLLCDILWSDPIKDVQGWRMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKAKLNFGSTTTAKPGNSPAGVKSFLGTKV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi923g00015 298 CDD MPP_PP1_PPKL 5 266 - -
Gabi923g00015 298 SUPERFAMILY Metallo-dependent phosphatases 17 271 IPR029052 -
Gabi923g00015 298 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 167 - -
Gabi923g00015 298 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Gabi923g00015 298 Gene3D - 1 277 IPR029052 -
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 230 246 IPR006186 GO:0016787
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 208 228 IPR006186 GO:0016787
Gabi923g00015 298 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Gabi923g00015 298 Pfam Calcineurin-like phosphoesterase 54 218 IPR004843 GO:0016787
Gabi923g00015 298 SMART pp2a_7 26 268 IPR006186 GO:0016787
Gabi923g00015 298 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi923g00015 Gabi-Chr923 98785 108063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi923g00015 55 165 Calmodulin-binding Proteins AT5G63870 37.391 3.07e-19 84.3