Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi913g00013 ATGCTATCAAGGTTGATGGACTTTCTGTGCGCCTGCTGGCGGCGAAGATCCTCGGACGGCAAGGGTGGTTCCGATGTTTCGGGGAGGAAGGAAGGGCTGCTGTGGTACAAGGATGTCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCAAATAACTTGCTTGAGGATCAGAGCCAGGTTGAGTCTGGTCCTCTTAGCTTGCTTGAAAATGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGTCACGGTGGACCTGAGACTTCGCGCTACATTTGTGATCGTCTCTTCCAACATTTAAAACGATTTGCGTCTGAGCAGAAGTCCATGTCAGTGGATGTTATTAGGAAGGCGTATCAAGCCACGGAAGAAGGTTTTCTGTCAGTGGTTACTAAAGAGTGGCCTATGAATGCCCAGATTGCAGCAGTGGGATCTTGTTGTTTGGTTAGTGTAATTTGTGGCGGTGTCCTCTATGTTGCTAACCTTGGGGATTCTCGTGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGAGGTTCTGGCGATCCAACTTTCCTCGGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGATCCGAAAATCGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATTCAGGTTTCTAGATCCATTGGAGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCATTGTATGCTAAGTTTCGTCTTCGGGAAGCTTTTAAAAGGCCAATTTTAAGCTCTGATCCATCAATTTCTGTTCATGAACTTCAACAGCATGATCAATTTCTCATATTTGCATCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCATCCACACACTGGAAGTGCTCGGAAGCTCATCAAAGCTGCTTTGCTGGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGACCGCGGTGTTCGCCGGCATTTCCACGATGACATCACTGTTGTAGTTGTATTTCTTGATTCCAATCTTGTCAGCAGAGCCAGCTCACTAAGAGGTCCTCCTTTATCAGTGAGGGGAGGTGGTGTTCCCCTACCTTCTAGAACTCTGGCTCCCTGCGCTGAACCTATGGAACTTAATTCTAGTTGA 1191 0.4618 MLSRLMDFLCACWRRRSSDGKGGSDVSGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQVESGPLSLLENGPYGTFVGVYDGHGGPETSRYICDRLFQHLKRFASEQKSMSVDVIRKAYQATEEGFLSVVTKEWPMNAQIAAVGSCCLVSVICGGVLYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLREAFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHTGSARKLIKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSLRGPPLSVRGGGVPLPSRTLAPCAEPMELNSS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi913g00013 396 Pfam Protein phosphatase 2C 79 325 IPR001932 -
Gabi913g00013 396 ProSiteProfiles PPM-type phosphatase domain profile. 43 354 IPR001932 -
Gabi913g00013 396 FunFam Phosphatase 2C family protein 35 364 - -
Gabi913g00013 396 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Gabi913g00013 396 PANTHER PROTEIN PHOSPHATASE 30 352 IPR015655 GO:0004722|GO:0006470
Gabi913g00013 396 CDD PP2Cc 44 354 IPR001932 -
Gabi913g00013 396 Gene3D - 35 364 IPR036457 -
Gabi913g00013 396 SMART PP2C_4 36 352 IPR001932 -
Gabi913g00013 396 SUPERFAMILY PP2C-like 53 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi913g00013 Gabi-Chr913 153185 160095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi913g00013 1 382 PP2C-type Phosphatase Gene Family AT3G51370 75.718 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi913g00013 K01102 - gmx:100782689 711.064