Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi913g00012 ATGCTATCAAGGTTGATGGACTTTCTGTGCGCCTGCTGGCGGCGAAGATCCTCGGACGGCAAGGGTGGTTCCGATGTTTCGGGGAGGAAGGAAGGGCTGCTGTGGTACAAGGATGTCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCAAATAACTTGCTTGAGGATCAGAGCCAGGTTGAGTCTGGTCCTCTTAGCTTGCTTGAAAATGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGTCACGGTGGACCTGAGACTTCGCGCTACATTTGTGATCGTCTCTTCCAACATTTAAAACGTAATGGTTTTTTTTTTTTAAAAAGATTTGCGTCTGAGCAGAAGTCCATGTCAGTGGATGTTATTAGGAAGGCGTATCAAGCCACGGAAGAAGGTTTTCTGTCAGTGGTTACTAAAGAGTGGCCTATGAATGCCCAGATTGCAGCAGTGGGATCTTGTTGTTTGGTTAGTGTAATTTGTGGCGGTGTCCTCTATGTTGCTAACCTTGGGGATTCTCGTGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGAGGTTCTGGCGATCCAACTTTCCTCGGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGATCCGAAAATCGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATTCAGGTTTCTAGATCCATTGGAGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCATTGTATGCTAAGTTTCGTCTTCGGGAAGCTTTTAAAAGGCCAATTTTAAGCTCTGATCCATCAATTTCTGTTCATGAACTTCAACAGCATGATCAATTTCTCATATTTGCATCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCATCCACACACTGGAAGTGCTCGGAAGCTCATCAAAGCTGCTTTGCTGGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGACCGCGGTGTTCGCCGGCATTTCCACGATGACATCACTGTTGTAGTTGTATTTCTTGATTCCAATCTTGTCAGCAGAGCCAGCTCACTAAGAGGTCCTCCTTTATCAGTGAGGGGAGGTGGTGTTCCCCTACCTTCTAGAACTCTGGCTCCCTGCGCTGAACCTATGGAACTTAATTCTAGTTGA 1215 0.4551 MLSRLMDFLCACWRRRSSDGKGGSDVSGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQVESGPLSLLENGPYGTFVGVYDGHGGPETSRYICDRLFQHLKRNGFFFLKRFASEQKSMSVDVIRKAYQATEEGFLSVVTKEWPMNAQIAAVGSCCLVSVICGGVLYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLREAFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHTGSARKLIKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSLRGPPLSVRGGGVPLPSRTLAPCAEPMELNSS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi913g00012 404 CDD PP2Cc 44 362 IPR001932 -
Gabi913g00012 404 Gene3D - 35 372 IPR036457 -
Gabi913g00012 404 SUPERFAMILY PP2C-like 53 363 IPR036457 -
Gabi913g00012 404 ProSiteProfiles PPM-type phosphatase domain profile. 43 362 IPR001932 -
Gabi913g00012 404 FunFam Phosphatase 2C family protein 35 372 - -
Gabi913g00012 404 SMART PP2C_4 36 360 IPR001932 -
Gabi913g00012 404 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Gabi913g00012 404 Pfam Protein phosphatase 2C 79 333 IPR001932 -
Gabi913g00012 404 PANTHER PROTEIN PHOSPHATASE 30 360 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi913g00012 Gabi-Chr913 153181 160097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi913g00012 1 390 PP2C-type Phosphatase Gene Family AT3G51370 74.169 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi913g00012 K01102 - gmx:100782689 703.745