Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi913g00011 ATGCTATCAAGGTTGATGGACTTTCTGTGCGCCTGCTGGCGGCGAAGATCCTCGGACGGCAAGGGTGGTTCCGATGTTTCGGGGAGGAAGGAAGGGCTGCTGTGGTACAAGGATGTCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCAAATAACTTGCTTGAGGATCAGAGCCAGGTTGAGTCTGGTCCTCTTAGCTTGCTTGAAAATGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGTCACGGTGGACCTGAGACTTCGCGCTACATTTGTGATCGTCTCTTCCAACATTTAAAACGTAATGGAGCAAGATTTGCGTCTGAGCAGAAGTCCATGTCAGTGGATGTTATTAGGAAGGCGTATCAAGCCACGGAAGAAGGTTTTCTGTCAGTGGTTACTAAAGAGTGGCCTATGAATGCCCAGATTGCAGCAGTGGGATCTTGTTGTTTGGTTAGTGTAATTTGTGGCGGTGTCCTCTATGTTGCTAACCTTGGGGATTCTCGTGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGAGGTTCTGGCGATCCAACTTTCCTCGGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGATCCGAAAATCGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATTCAGGTTTCTAGATCCATTGGAGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCATTGTATGCTAAGTTTCGTCTTCGGGAAGCTTTTAAAAGGCCAATTTTAAGCTCTGATCCATCAATTTCTGTTCATGAACTTCAACAGCATGATCAATTTCTCATATTTGCATCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCATCCACACACTGGAAGTGCTCGGAAGCTCATCAAAGCTGCTTTGCTGGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGACCGCGGTGTTCGCCGGCATTTCCACGATGACATCACTGTTGTAGTTGTATTTCTTGATTCCAATCTTGTCAGCAGAGCCAGCTCACTAAGAGGTCCTCCTTTATCAGTGAGGGGAGGTGGTGTTCCCCTACCTTCTAGAACTCTGGCTCCCTGCGCTGAACCTATGGAACTTAATTCTAGTTGA 1203 0.4613 MLSRLMDFLCACWRRRSSDGKGGSDVSGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQVESGPLSLLENGPYGTFVGVYDGHGGPETSRYICDRLFQHLKRNGARFASEQKSMSVDVIRKAYQATEEGFLSVVTKEWPMNAQIAAVGSCCLVSVICGGVLYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLREAFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHTGSARKLIKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSLRGPPLSVRGGGVPLPSRTLAPCAEPMELNSS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi913g00011 400 SMART PP2C_4 36 356 IPR001932 -
Gabi913g00011 400 CDD PP2Cc 44 358 IPR001932 -
Gabi913g00011 400 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Gabi913g00011 400 SUPERFAMILY PP2C-like 53 359 IPR036457 -
Gabi913g00011 400 Pfam Protein phosphatase 2C 79 329 IPR001932 -
Gabi913g00011 400 Gene3D - 35 368 IPR036457 -
Gabi913g00011 400 ProSiteProfiles PPM-type phosphatase domain profile. 43 358 IPR001932 -
Gabi913g00011 400 FunFam Phosphatase 2C family protein 35 368 - -
Gabi913g00011 400 PANTHER PROTEIN PHOSPHATASE 30 356 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi913g00011 Gabi-Chr913 153181 160097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi913g00011 1 386 PP2C-type Phosphatase Gene Family AT3G51370 74.935 0.0 603