Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi913g00010 ATGCTATCAAGGTTGATGGACTTTCTGTGCGCCTGCTGGCGGCGAAGATCCTCGGACGGCAAGGGTGGTTCCGATGTTTCGGGGAGGAAGGAAGGGCTGCTGTGGTACAAGGATGTCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCAAATAACTTGCTTGAGGATCAGAGCCAGGTTGAGTCTGGTCCTCTTAGCTTGCTTGAAAATGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGTCACGGTGGACCTGAGACTTCGCGCTACATTTGTGATCGTCTCTTCCAACATTTAAAACGTAATGAAAATGGTGTTGGATTTGCGTCTGAGCAGAAGTCCATGTCAGTGGATGTTATTAGGAAGGCGTATCAAGCCACGGAAGAAGGTTTTCTGTCAGTGGTTACTAAAGAGTGGCCTATGAATGCCCAGATTGCAGCAGTGGGATCTTGTTGTTTGGTTAGTGTAATTTGTGGCGGTGTCCTCTATGTTGCTAACCTTGGGGATTCTCGTGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGAGGTTCTGGCGATCCAACTTTCCTCGGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGATCCGAAAATCGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATTCAGGTTTCTAGATCCATTGGAGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCATTGTATGCTAAGTTTCGTCTTCGGGAAGCTTTTAAAAGGCCAATTTTAAGCTCTGATCCATCAATTTCTGTTCATGAACTTCAACAGCATGATCAATTTCTCATATTTGCATCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCATCCACACACTGGAAGTGCTCGGAAGCTCATCAAAGCTGCTTTGCTGGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGACCGCGGTGTTCGCCGGCATTTCCACGATGACATCACTGTTGTAGTTGTATTTCTTGATTCCAATCTTGTCAGCAGAGCCAGCTCACTAAGAGGTCCTCCTTTATCAGTGAGGGGAGGTGGTGTTCCCCTACCTTCTAGAACTCTGGCTCCCTGCGCTGAACCTATGGAACTTAATTCTAGTTGA 1209 0.4599 MLSRLMDFLCACWRRRSSDGKGGSDVSGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQVESGPLSLLENGPYGTFVGVYDGHGGPETSRYICDRLFQHLKRNENGVGFASEQKSMSVDVIRKAYQATEEGFLSVVTKEWPMNAQIAAVGSCCLVSVICGGVLYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLREAFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHTGSARKLIKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSLRGPPLSVRGGGVPLPSRTLAPCAEPMELNSS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi913g00010 402 Pfam Protein phosphatase 2C 79 331 IPR001932 -
Gabi913g00010 402 PANTHER PROTEIN PHOSPHATASE 30 358 IPR015655 GO:0004722|GO:0006470
Gabi913g00010 402 SMART PP2C_4 36 358 IPR001932 -
Gabi913g00010 402 FunFam Phosphatase 2C family protein 35 370 - -
Gabi913g00010 402 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Gabi913g00010 402 ProSiteProfiles PPM-type phosphatase domain profile. 43 360 IPR001932 -
Gabi913g00010 402 SUPERFAMILY PP2C-like 53 361 IPR036457 -
Gabi913g00010 402 CDD PP2Cc 44 360 IPR001932 -
Gabi913g00010 402 Gene3D - 35 370 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi913g00010 Gabi-Chr913 153181 160097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi913g00010 1 388 PP2C-type Phosphatase Gene Family AT3G51370 74.550 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi913g00010 K01102 - gmx:100782689 704.516