Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi913g00006 ATGGAGTTTGTGGCAAATCAATGCCCTTTTTTGGGTTCCTTGTGGAATTTCATTGAGAGGGTCAAACGGGTTGTTAGCCTCGCCGTCGCTGCCATCGTTGGGAACATCTTCTCTGCGATCTTGACCTTCTGCTTTGCATCAGTGGGAACTTTGTTGGGGGCTATGACTGGAGCCTTGATAGGGCAAGAGACAGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGTGCCATGTCAGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCTCTTATTCTTTGGCAATCTGATGCATCTGGAACTGAGTGTCTCTTATACTTGATTGATGTTATTGCTAGTTTACTCAGTGGGAGACTTGTGCGTGAAAGGATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGTTGCTGTTGAAATGAGATTTGATGAGGTTCAAAACATCTTTGACACTGGCGGTGCAAAAGGTTTATCAGGAGATTCGGTTGAAAAGATCCCAATGATCACAATTACAAGTGACAACAATGTTGATGCTTTTGGTGAAAGAGTTTCATGTTCAGTTTGCCTCCAGGATTTTCAGCATGGAGAGACAGGTAGAAGCTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATTGATAAGTGGCTCATAAGGCATGGTTCTTGTCCATTATGCAGAAGGGATCTGTAA 696 0.4454 MEFVANQCPFLGSLWNFIERVKRVVSLAVAAIVGNIFSAILTFCFASVGTLLGAMTGALIGQETESGFIRGAAVGAMSGAVFSIEVFESSLILWQSDASGTECLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMVAVEMRFDEVQNIFDTGGAKGLSGDSVEKIPMITITSDNNVDAFGERVSCSVCLQDFQHGETGRSLPHCHHMFHLPCIDKWLIRHGSCPLCRRDL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi913g00006 231 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 230 IPR044523 -
Gabi913g00006 231 SMART ring_2 186 227 IPR001841 -
Gabi913g00006 231 SUPERFAMILY RING/U-box 174 231 - -
Gabi913g00006 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 231 IPR013083 -
Gabi913g00006 231 FunFam NEP1-interacting protein-like 1 146 231 - -
Gabi913g00006 231 ProSiteProfiles Zinc finger RING-type profile. 186 228 IPR001841 -
Gabi913g00006 231 Pfam Ring finger domain 185 228 IPR001841 -
Gabi913g00006 231 CDD RING-H2_NIPL1-like 185 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi913g00006 Gabi-Chr913 103539 105164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi913g00006 18 231 C3H Transcription Factor Family AT5G66070 74.299 1.42e-110 315