Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi911g00009 ATGAATCTTTCTTCATTCTTCTCCTGTGCATTCTGGTCCACAAGCCTCCATGTGGTTCTTCTCTTTTCTGCCACCCTACTATGTTTGCAACCTAATAATACTGCTAGTGCCTTAGGAAATGACACAGACCAATTGTCATTGTTAAGATTCAAAGAAGCAGTTCAAGATGACCCATTAGGTATCTTGACTTCATGGAATAGTTCAACTTACTTTTGCAACTGGCATGGAGTCACATGCAGCCTCAGGCATCAAAGGGTCACTGCCCTAAACCTACAAGGGTATGGCTTACGTGGGTTGATACCATCTGAGATTGGCAACCTCACCTTTTTAAGGTATGTCAACCTTCAAAACAACAGCTTCTATGGTGAAATACCACAGGAAATAGGTCGTTTGTTTAGGCTGCAGCAATTGTATCTCACCAATAACACATTAAGGGGTCAAATTCCCACCAACTTGTCTGGTTGCTCTGAACTCAAGAGTTTGAGTTTAAGAGGAAACAAACTTGTTGGCAAAATACCTACGGAGCTTGGTTTTCTAACTAAGCTAGAAGAGCTATATATTGCTGTGAACAATTTGACAGGTGAAATCCCTGCCTCTATAGGCAATCTTTCATCTCTTAGTATTCTCTCTCTGGGGATCAATAACTTAGAGGGAAATGTACCAGAAGAGATAAGTCATCTGAAAAACTTGACACATATCTCTATTGCATCCAACAAACTATCTGGTATGCTTCCTTCTACACTCTACAATATGTCATCTCTCACCTACTTCTCAGCTGCAGTGAATCAATTTAATGGTTCCCTACCTTCCAACATGTTCCTCACACTCCCTAATCTCCAACAATTTGGGATTGGTATGAATAAGATCTCAGGTCCTATCCCAGCTTCCATCTCCAATGCAACCCGTTTGCTATTATTTAACATCCCCAGGAATAACTTTGTAGGACAAGTTCCAATTGGAATAGGAAATCTCCAAGACATCTGGTTTATTGCTCTGGAATACAATCATCTAGGGAGTAATTCATCTAATGACTTGGATTTCTTGACATCTTTGACAAACTGCACCAAACTACAAGTGTTAGATTTAAATGTAAACAACTTTGGTGGTTCTTTACCCAACTCAGTAGCCAACTTTTCAACTCAACTGAACCAGTTTTATATTGGTGGCAATCAGATTACTGGTACTATTCCTGCAGGATTAGGAAATCTCATTGAATTGATTGGCTTCGAACTGGAGTTCAACCTTCTCACAGGGTCCATTCCAACTTCTTTTGGCAAGTTTCAAAAGATACAATTATTGAATTTAAATGCAAACAAACTTTCAGGAGAAATTCCATCATCCATTGGCAATCTTAGTCAGTTGTCTCAACTTGACTTATCAAATAATATTCTGGAAGGAAGCATTCCTCCTAGTATTGGGAATTGCCAATATTTACAGTACCTAGACCTTTCACATAACAACCTTAGTGGAACTATTCCTTTGCAGGTGCTTGGTCTCCCCTCTTTGTCATTGTTACTGAACTTATCCCAGAACTCATTAAATGGTAGCCTACCCTCTGAAGTTGGCAACCTGAAAAGCATCAATAAGTTGGATGTTTCTAAAAATGTGCTGTCTGGTGAAATTCCTGCAACAATTGGAGAGTGCATAACCTTGGAATACCTTAACTTACAAGGGAATTCCTTCCTGGGAGCCATACCTTCATCATTGGCTTCATTGAAAGGTCTTCAATATTTAGATTTGTCACAGAACAACTTGTCTGGATCAATTCCAGAAGGTCTAGAGGGTATTCCTTTTCTACAGTATTTGAATATTTCTTTCAACAGGTTGGATGGTGAAGTACCAATAAAAGGTGTCTTTAGAAATGCAAGTGCAATATCAATAAAAGGAAACAGTGACCTTTGTGGTGGTATCACTGAGCTACATCTACCACCATGCCCTGTCAAAGTTATGACACACAAAAAACATCAGGCTTGGAAGGACATAGTAATAATAATTTCTGTGGTTTTCTTTCTCCTACTGTTGTTATCTTCTTTTGTTGTCTGTTGGAAGAAAAGAACAAACTGGAGAACATCTACTTCCCCAACAACAGTGGATCATCTTGCCAAGGTCTCATACCAGACACTCCACCAAGCAACAAATGGATTCTCTCCCAATAACTTGGTAGGATCTGGTGCTTTTGGCTCTGTGTATAAAGGAACTTTTGAGTCAGAAGAAAAAGTTGTTGCTATTAAAGTCTTGAACCTTCAAAAGAAGGGAGCTCAGAAGAGTTTCATTGCTGAATGTAATGCACTCAGAAATATCCGTCACAGAAATCTGGTTAAGATTCTAACATGTTGCTCAAGTATGGATTACAATGGAAACGAATTTAAAGCTTTAGTTTTTGAGTACATGGAAAATGGAAGCTTAGAGAAATGGTTGCATCCTGAGTCAGAAATTGGAGATCAACCAAGTTTGGACCTTCTTCAAAGACTGAATATTCTCATAGATGTTGGTTCTGCATTATTCTATCTTCACCATGAATGTGAGCAGCCAATTGTTCACTGTGATTTAAAGCCAAACAATATCCTTCTTGATAATGACATGGTTGCTCATGTGAATGATTTTGGACTAGCAAGACTTCTCTCTACTATCAGTGGTATCTCTCATCCTCAATCAAGCACAATTGGAATCAAGGGAACTGTTGGGTATGCTCCTCCAGAGTATGGAATGGGAGGTGAAGTTTCAACACTTGGTGACATGTATAGCTTTGGAATCCTTGTACTGGAAATACTAACTGGAAGGAAGCCCACAGATGAAATGTTTATAAATGGTATCAATCTCCATACTTTTGTCAAAGTTTCCTTGCCAGATAAACTCCTACAGATAGTGGACTCAGCCATTCTCCCAAGAGAATTGAAAAAAGAATTTGTATCAGCAGAAGAAGAAAACAATATTAGTAATCAGAACCAGAGTCAGATGCATCCCAATGATTTCAAGAAGTGCTTACTTGAACTGTTTAGCATTGGACTTGCTTGTTCTGCAGAGTCACCAAAAGAAAGAATGAATATGAGGGATGTCACAAGGGAACTAAATGTAATCAAAAATGCTTTTTTCAAAGGCAGATCAATAGAGACTCACTGA 3120 0.3878 MNLSSFFSCAFWSTSLHVVLLFSATLLCLQPNNTASALGNDTDQLSLLRFKEAVQDDPLGILTSWNSSTYFCNWHGVTCSLRHQRVTALNLQGYGLRGLIPSEIGNLTFLRYVNLQNNSFYGEIPQEIGRLFRLQQLYLTNNTLRGQIPTNLSGCSELKSLSLRGNKLVGKIPTELGFLTKLEELYIAVNNLTGEIPASIGNLSSLSILSLGINNLEGNVPEEISHLKNLTHISIASNKLSGMLPSTLYNMSSLTYFSAAVNQFNGSLPSNMFLTLPNLQQFGIGMNKISGPIPASISNATRLLLFNIPRNNFVGQVPIGIGNLQDIWFIALEYNHLGSNSSNDLDFLTSLTNCTKLQVLDLNVNNFGGSLPNSVANFSTQLNQFYIGGNQITGTIPAGLGNLIELIGFELEFNLLTGSIPTSFGKFQKIQLLNLNANKLSGEIPSSIGNLSQLSQLDLSNNILEGSIPPSIGNCQYLQYLDLSHNNLSGTIPLQVLGLPSLSLLLNLSQNSLNGSLPSEVGNLKSINKLDVSKNVLSGEIPATIGECITLEYLNLQGNSFLGAIPSSLASLKGLQYLDLSQNNLSGSIPEGLEGIPFLQYLNISFNRLDGEVPIKGVFRNASAISIKGNSDLCGGITELHLPPCPVKVMTHKKHQAWKDIVIIISVVFFLLLLLSSFVVCWKKRTNWRTSTSPTTVDHLAKVSYQTLHQATNGFSPNNLVGSGAFGSVYKGTFESEEKVVAIKVLNLQKKGAQKSFIAECNALRNIRHRNLVKILTCCSSMDYNGNEFKALVFEYMENGSLEKWLHPESEIGDQPSLDLLQRLNILIDVGSALFYLHHECEQPIVHCDLKPNNILLDNDMVAHVNDFGLARLLSTISGISHPQSSTIGIKGTVGYAPPEYGMGGEVSTLGDMYSFGILVLEILTGRKPTDEMFINGINLHTFVKVSLPDKLLQIVDSAILPRELKKEFVSAEEENNISNQNQSQMHPNDFKKCLLELFSIGLACSAESPKERMNMRDVTRELNVIKNAFFKGRSIETH 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi911g00009 1039 SUPERFAMILY L domain-like 42 337 - -
Gabi911g00009 1039 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Gabi911g00009 1039 SMART LRR_typ_2 596 621 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 451 475 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 227 250 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 131 155 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 572 595 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 499 524 IPR003591 -
Gabi911g00009 1039 SMART LRR_typ_2 179 203 IPR003591 -
Gabi911g00009 1039 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 797 1035 - -
Gabi911g00009 1039 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 42 153 - -
Gabi911g00009 1039 Gene3D Phosphorylase Kinase; domain 1 677 796 - -
Gabi911g00009 1039 FunFam LRR receptor-like serine/threonine-protein kinase EFR 686 796 - -
Gabi911g00009 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Gabi911g00009 1039 CDD STKc_IRAK 721 1024 - -
Gabi911g00009 1039 Gene3D Ribonuclease Inhibitor 341 646 IPR032675 -
Gabi911g00009 1039 Gene3D Ribonuclease Inhibitor 219 337 IPR032675 -
Gabi911g00009 1039 SUPERFAMILY L domain-like 380 635 - -
Gabi911g00009 1039 Gene3D Transferase(Phosphotransferase) domain 1 797 1034 - -
Gabi911g00009 1039 PRINTS Leucine-rich repeat signature 572 585 - -
Gabi911g00009 1039 PRINTS Leucine-rich repeat signature 478 491 - -
Gabi911g00009 1039 SMART serkin_6 715 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi911g00009 1039 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Gabi911g00009 1039 ProSiteProfiles Leucine-rich repeat profile. 477 498 IPR001611 GO:0005515
Gabi911g00009 1039 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 651 - -
Gabi911g00009 1039 ProSiteProfiles Protein kinase domain profile. 715 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi911g00009 1039 Gene3D Ribonuclease Inhibitor 38 218 IPR032675 -
Gabi911g00009 1039 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Gabi911g00009 1039 Pfam Leucine rich repeat 181 240 IPR001611 GO:0005515
Gabi911g00009 1039 Pfam Leucine Rich repeat 474 490 IPR001611 GO:0005515
Gabi911g00009 1039 PANTHER UNNAMED PRODUCT 348 933 - -
Gabi911g00009 1039 SUPERFAMILY Protein kinase-like (PK-like) 688 1023 IPR011009 -
Gabi911g00009 1039 Pfam Protein kinase domain 718 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi911g00009 1039 FunFam Leucine-rich receptor-like protein kinase family protein 172 270 - -
Gabi911g00009 1039 SMART LRR_sd22_2 179 205 - -
Gabi911g00009 1039 SMART LRR_sd22_2 227 253 - -
Gabi911g00009 1039 SMART LRR_sd22_2 572 595 - -
Gabi911g00009 1039 SMART LRR_sd22_2 451 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi911g00009 Gabi-Chr911 135719 138952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi911g00009 40 1033 Receptor kinase-like Gene Family AT3G47570 47.117 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gabi911g00009 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi911g00009 - - qsa:O6P43_025027 1388.24