Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi911g00006 ATGGAGAGCACAAGAATGAGCCAATGGTTAAGTCTCCTAATATGTGGACTGCTATTACTAAAGGCAGAAGGGATTTCCGTGCGAATAACTTATGTTGAAAGTGCAGTACCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCACCAGCTTACCACTTTGATAAGGGAGTCGGAGCAGGGATTAACAACTGGATAGTTCATTTTGAGGGAGGAGGATGGTGCAACAATGTCACCACTTGCCTTGACCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATCAGCAACTTTCCTTTTCTGGATTTTTCAGTAACAGCCAAAAATTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTACTGTGATGGGTCATCATTCACTGGTGACGTTGAAGCAGTGGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAGTGTGATCACTTCAAAGCTCTATTACCTACATCAACTAAAGTGAAATGCCTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCTCTGGAGCACAACACATTCAAGAGCTCTACAGTCAAGTTGTTGAAACACATGGTTCAGCGAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGCCCCGGGCTGTGCTTTTTCCCGCAAAATGTGGCATCACAAATCAATACACCGATCTTCTTTGTAAATGCGGCCTATGACTCATGGCAGATTAAGAACATTTTGGCACCCGGTGTTGCTGATCCCCATGGCCAGTGGCGTAACTGCAAGCTTGATATAAAAAACTGCTCACCTGGTCAACTAAATACAATGCAAGGTTTCAGGACGGAATTCTTAAAGGCTTTGAGTGTGGTTGGGAACTCTCCTTCTAAAGGAACGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGGAATGCAAGAGACATGGTTGAGAAATGACTCTCCACTGCTGGCCAATACTACAATAGCAAAGGCGGTGGGAGACTGGTTTTATGAACGAAGGTCTTTCCATCAGATAGATTGCACTTACCCTTGCAACCCTACTTGTCATAACCGTGTTTTCGATCCTTAA 1182 0.4255 MESTRMSQWLSLLICGLLLLKAEGISVRITYVESAVPKGAVCLDGSPPAYHFDKGVGAGINNWIVHFEGGGWCNNVTTCLDRRDTRLGSSKKMDQQLSFSGFFSNSQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDHFKALLPTSTKVKCLSDAGYFINVKDVSGAQHIQELYSQVVETHGSAKNLPTSCTSRLSPGLCFFPQNVASQINTPIFFVNAAYDSWQIKNILAPGVADPHGQWRNCKLDIKNCSPGQLNTMQGFRTEFLKALSVVGNSPSKGTFIDSCYAHCQTGMQETWLRNDSPLLANTTIAKAVGDWFYERRSFHQIDCTYPCNPTCHNRVFDP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi911g00006 393 PANTHER NOTUM-RELATED 12 388 IPR004963 GO:0016787
Gabi911g00006 393 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi911g00006 Gabi-Chr911 47085 52921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi911g00006 5 393 Carbohydrate Esterase AT4G19420 61.085 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi911g00006 K19882 - gmx:100781246 700.279