Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi908g00006 ATGGATTTGAAGAGGACGTTATCGGATCTATCCTTAAAGAAACTCTCAAGGCATTGGAGTACCTTCATCGACAGGGTCATATCCATCGTGATGTTAAGGCTGGTAACATTTTGCTCAATAGTAACGGCGCCGTTAAGCTTGCTGACTTTGGTGTTTCCGCTTGCGTTTTTGATAACGGCGATAGACAGCGTTCTAGAAACACTTTTGATGGCTCCTGAGGTATTGCAACCGGGAAGTGGTTATGATTCCAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTCGAGTTGGCTCATGGCCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACAATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTCGTGAAAGATCAAACAAAGAGGCCATCAGCTGAGAAGTTACTGAAACATTCCTTCTTCAAAAATGCTAAGCCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCACTTTGGAATCGTGTAAAAGCTCTCCAGCTCAAAGATGCAGCTCAACTAGCACTGAAGAAAATGCCTTCTGCCGAACAGGAAGCAATATCTCAGAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAAGCTTCATCGGTGAACGATGATGATGATATTATAGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACTAATGACAAGGCTACTGATGCAACTGATCCACAGTCTGGTGTTGGCAAAAAGAATTCAGAGAAAATACCTCAAGATAAGATAACATCACAAGTGGGTGGTATTGAAATACTACAAACTGAGCAGAGTGAATACTTGAACAAAAAGGAGAAGATTCTTGAAAGTGATCTCCAGGAACCTAGATTGCCCAAAAATTTTATTTGGAAGAGAAATGGATCGAACACGGAGACAACAACATTAACTGTAGAGAAGGACATGGGTAAGAGCAAGATTAAAGCTCAATCTGTGGAATGTCGTCAAACCCAAAGTGGGCCCCTGATGCCAGGCAGAGTTCTCAGTCATTCTTTATCAGAAAGAGGACGTACATTTGAAAGGCTTGAGAATGGAAATCAATTACCAAGTAAAAAATATAATCATGAACTGCGACGAGCTCCAAGTTTTAGTGGTCCTTTGATGCTTCCAACTCGGGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTCACGTCAGAAAATTTAGATATTGTGAAGGATATTCCTTTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCAGCACTACGGAAATCTACCAGTGTTGCTGATTGGATGTTGGATTTGAAACAAATGCCAATTGGTCAGGCCGCCAAAGATTCTGCGGCTACCAATATCTCTCCGTCACTTCTTATGCCTCACCTTCAAAATCTTTCCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGTTTGCAACCTGCTGAAGCAATTGATGTATCTCAGAATGGAAAGTTGCCACCATTACCTCACAGTTCAGAGATCAATGGAAGTGTTGATGTAGCAGCTTCAGAAAGGGAACGTCTTCTGCTGGTCAAAGTTTCAGAGCTTCAGACTCGGATGATCAATTTAACCGATGAACTGACTGCTGAGAAATTAAAATACATGCAGTTGCAACAACAGCTAACAGCTTTCTACAGTCAGGAGCAAAATGGGGACAGAAGAGAGGAAGTTGCATGA 1866 0.4121 MDLKRTLSDLSLKKLSRHWSTFIDRVISIVMLRLVTFCSIVTAPLSLLTLVFPLAFLITAIDSVLETLLMAPEVLQPGSGYDSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDLDDLKAQASSVNDDDDIIEMREEDENNFFTNDKATDATDPQSGVGKKNSEKIPQDKITSQVGGIEILQTEQSEYLNKKEKILESDLQEPRLPKNFIWKRNGSNTETTTLTVEKDMGKSKIKAQSVECRQTQSGPLMPGRVLSHSLSERGRTFERLENGNQLPSKKYNHELRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDIVKDIPLSSVSRRSSQGSALRKSTSVADWMLDLKQMPIGQAAKDSAATNISPSLLMPHLQNLSQQTSIQQDLIMNLLNSLQPAEAIDVSQNGKLPPLPHSSEINGSVDVAASERERLLLVKVSELQTRMINLTDELTAEKLKYMQLQQQLTAFYSQEQNGDRREEVA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi908g00006 621 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 68 594 IPR047173 GO:0043539
Gabi908g00006 621 MobiDBLite consensus disorder prediction 257 274 - -
Gabi908g00006 621 MobiDBLite consensus disorder prediction 256 276 - -
Gabi908g00006 621 Pfam Protein kinase domain 69 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00006 621 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00006 621 Coils Coil 576 603 - -
Gabi908g00006 621 Gene3D Transferase(Phosphotransferase) domain 1 58 178 - -
Gabi908g00006 621 SUPERFAMILY Protein kinase-like (PK-like) 70 218 IPR011009 -
Gabi908g00006 621 SMART serkin_6 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi908g00006 Gabi-Chr908 52230 61865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi908g00006 70 612 MAP Kinase Kinase Kinase Kinase AT4G10730 60.734 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi908g00006 Pkinase 7.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi908g00006 - - lja:Lj0g3v0323609.4 852.047