Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi908g00005 ATGGATTTGAAGAGGACGTTATCGGATCTATCCTTAAAGAAACTCTCAAGGCATTGGAGTACCTTCATCGACAGGGTCATATCCATCGTGATGTTAAGGCTGGTAACATTTTGCTCAATAGTAACGGCGCCGTTAAGCTTGCTGACTTTGGTGTTTCCGCTTGCGTTTTTGATAACGGCGATAGACAGCGTTCTAGAAACACTTTTGTGGGTACTCCTTGCTGGTTGGATGGCTCCTGAGGTATTGCAACCGGGAAGTGGTTATGATTCCAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTCGAGTTGGCTCATGGCCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACAATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTCGTGAAAGATCAAACAAAGAGGCCATCAGCTGAGAAGTTACTGAAACATTCCTTCTTCAAAAATGCTAAGCCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCACTTTGGAATCGTGTAAAAGCTCTCCAGCTCAAAGATGCAGCTCAACTAGCACTGAAGAAAATGCCTTCTGCCGAACAGGAAGCAATATCTCAGAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAAGCTTCATCGGTGAACGATGATGATGATATTATAGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACTAATGACAAGGCTACTGATGCAACTGATCCACAGTCTGGTGTTGGCAAAAAGAATTCAGAGAAAATACCTCAAGATAAGATAACATCACAAGTGGGTGGTATTGAAATACTACAAACTGAGCAGAGTGAATACTTGAACAAAAAGGAGAAGATTCTTGAAAGTGATCTCCAGGAACCTAGATTGCCCAAAAATTTTATTTGGAAGAGAAATGGATCGAACACGGAGACAACAACATTAACTGTAGAGAAGGACATGGGTAAGAGCAAGATTAAAGCTCAATCTGTGGAATGTCGTCAAACCCAAAGTGGGCCCCTGATGCCAGGCAGAGTTCTCAGTCATTCTTTATCAGAAAGAGGACGTACATTTGAAAGGCTTGAGAATGGAAATCAATTACCAAGTAAAAAATATAATCATGAACTGCGACGAGCTCCAAGTTTTAGTGGTCCTTTGATGCTTCCAACTCGGGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTCACGTCAGAAAATTTAGATATTGTGAAGGATATTCCTTTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCAGCACTACGGAAATCTACCAGTGTTGCTGATTGGATGTTGGATTTGAAACAAATGCCAATTGGTCAGGCCGCCAAAGATTCTGCGGCTACCAATATCTCTCCGTCACTTCTTATGCCTCACCTTCAAAATCTTTCCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGTTTGCAACCTGCTGAAGCAATTGATGTATCTCAGAATGGAAAGTTGCCACCATTACCTCACAGTTCAGAGATCAATGGAAGTGTTGATGTAGCAGCTTCAGAAAGGGAACGTCTTCTGCTGGTCAAAGTTTCAGAGCTTCAGACTCGGATGATCAATTTAACCGATGAACTGACTGCTGAGAAATTAAAATACATGCAGTTGCAACAACAGCTAACAGCTTTCTACAGTCAGGAGCAAAATGGGGACAGAAGAGAGGAAGTTGCATGA 1887 0.4139 MDLKRTLSDLSLKKLSRHWSTFIDRVISIVMLRLVTFCSIVTAPLSLLTLVFPLAFLITAIDSVLETLLWVLLAGWMAPEVLQPGSGYDSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDLDDLKAQASSVNDDDDIIEMREEDENNFFTNDKATDATDPQSGVGKKNSEKIPQDKITSQVGGIEILQTEQSEYLNKKEKILESDLQEPRLPKNFIWKRNGSNTETTTLTVEKDMGKSKIKAQSVECRQTQSGPLMPGRVLSHSLSERGRTFERLENGNQLPSKKYNHELRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDIVKDIPLSSVSRRSSQGSALRKSTSVADWMLDLKQMPIGQAAKDSAATNISPSLLMPHLQNLSQQTSIQQDLIMNLLNSLQPAEAIDVSQNGKLPPLPHSSEINGSVDVAASERERLLLVKVSELQTRMINLTDELTAEKLKYMQLQQQLTAFYSQEQNGDRREEVA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi908g00005 628 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 76 601 IPR047173 GO:0043539
Gabi908g00005 628 Coils Coil 583 610 - -
Gabi908g00005 628 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00005 628 SMART serkin_6 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00005 628 MobiDBLite consensus disorder prediction 264 281 - -
Gabi908g00005 628 Pfam Protein kinase domain 75 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00005 628 MobiDBLite consensus disorder prediction 263 283 - -
Gabi908g00005 628 Gene3D Transferase(Phosphotransferase) domain 1 62 185 - -
Gabi908g00005 628 SUPERFAMILY Protein kinase-like (PK-like) 70 225 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi908g00005 Gabi-Chr908 52230 61865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi908g00005 76 619 MAP Kinase Kinase Kinase Kinase AT4G10730 60.806 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi908g00005 Pkinase 6.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi908g00005 - - lja:Lj0g3v0323609.4 852.047