Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi908g00003 ATGGGAAGTCACGAAAGCTACTCTGCAAATCCCTCCGACTACAAGCTTCTAGAAGAAATCGGTTACGGTGCCACCGCCACAGTTTACAGAGCCATCTATCTTCCTTTCAACGAACTCGTCGCTATCAAATGCTTGGATCTCGATCGCTGCAACACTACCAATCTGGATGAGGTACGTAGGGAAACTCAAACGATGAGCTTAATTGATCATCCAAATGTGATGAAGGCTCACTGTTCCTTTGGTGTGGAACGGAGTCTCTGGGTTGTGATGCCATTCATGGATGAGGGTTCTTGTTTGCACTTAATGAAGATAGCTTATAGCGATGGATTTGAAGAGGACGTTATCGGATCTATCCTTAAAGAAACTCTCAAGGCATTGGAGTACCTTCATCGACAGGGTCATATCCATCGTGATGTTAAGGCTGGTAACATTTTGCTCAATAGTAACGGCGCCGTTAAGCTTGCTGACTTTGGTGTTTCCGCTTGCGTTTTTGATAACGGCGATAGACAGCGTTCTAGAAACACTTTTGTGGGTACTCCTTGCTGGATGGCTCCTGAGGTATTGCAACCGGGAAGTGGTTATGATTCCAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTCGAGTTGGCTCATGGCCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACAATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTCGTGAAAGATCAAACAAAGAGGCCATCAGCTGAGAAGTTACTGAAACATTCCTTCTTCAAAAATGCTAAGCCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCACTTTGGAATCGTGTAAAAGCTCTCCAGCTCAAAGATGCAGCTCAACTAGCACTGAAGAAAATGCCTTCTGCCGAACAGGAAGCAATATCTCAGAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAAGCTTCATCGGTGAACGATGATGATGATATTATAGAGATGAGGGAAGAAGATGAAATCATCTGTTGTTTGTTTTGTCATGACAGGATGCAACTGATCCACAGTCTGGTGTTGAGTGAATACTTGAACAAAAAGGAGAAGATTCTTGAAAGTGATCTCCAGGAACCTAGATTGCCCAAAAATTTTATTTGGAAGAGAAATGGATCGAACACGGAGACAACAACATTAACTGTAGAGAAGGACATGGGTAAGAGCAAGATTAAAGCTCAATCTGTGGAATGTCGTCAAACCCAAAGTGGGCCCCTGATGCCAGGCAGAGTTCTCAGTCATTCTTTATCAGAAAGAGGACGTACATTTGAAAGGCTTGAGAATGGAAATCAATTACCAAGTAAAAAATATAATCATGAACTGCGACGAGCTCCAAGTTTTAGTGGTCCTTTGATGCTTCCAACTCGGGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTCACGTCAGAAAATTTAGATATTGTGAAGGATATTCCTTTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCAGCACTACGGAAATCTACCAGTGTTGCTGATTGGATGTTGGATTTGAAACAAATGGTTTGTACACAAGCCATTTGCATCAAACCTAACTATTCTGCGGCTACCAATATCTCTCCGTCACTTCTTATGCCTCACCTTCAAAATCTTTCCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGTTTGCAACCTGCTGAAGCAATTGATGTATCTCAGAATGGAAAGTTGCCACCATTACCTCACAGTTCAGAGATCAATGGAAGTGTTGATGTAGCAGCTTCAGAAAGGGAACGTCTTCTGCTGGTCAAAGTTTCAGAGCTTCAGACTCGGATGATCAATTTAACCGATGAACTGACTGCTGAGAAATTAAAATACATGCAGTTGCAACAACAGCTAACAGCTTTCTACAGTCAGGAGCAAAATGGGGACAGAAGAGAGGAAGTTGCATGA 2136 0.4213 MGSHESYSANPSDYKLLEEIGYGATATVYRAIYLPFNELVAIKCLDLDRCNTTNLDEVRRETQTMSLIDHPNVMKAHCSFGVERSLWVVMPFMDEGSCLHLMKIAYSDGFEEDVIGSILKETLKALEYLHRQGHIHRDVKAGNILLNSNGAVKLADFGVSACVFDNGDRQRSRNTFVGTPCWMAPEVLQPGSGYDSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDLDDLKAQASSVNDDDDIIEMREEDEIICCLFCHDRMQLIHSLVLSEYLNKKEKILESDLQEPRLPKNFIWKRNGSNTETTTLTVEKDMGKSKIKAQSVECRQTQSGPLMPGRVLSHSLSERGRTFERLENGNQLPSKKYNHELRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDIVKDIPLSSVSRRSSQGSALRKSTSVADWMLDLKQMVCTQAICIKPNYSAATNISPSLLMPHLQNLSQQTSIQQDLIMNLLNSLQPAEAIDVSQNGKLPPLPHSSEINGSVDVAASERERLLLVKVSELQTRMINLTDELTAEKLKYMQLQQQLTAFYSQEQNGDRREEVA 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi908g00003 711 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Gabi908g00003 711 Pfam Protein kinase domain 14 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00003 711 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gabi908g00003 711 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 684 IPR047173 GO:0043539
Gabi908g00003 711 Gene3D Transferase(Phosphotransferase) domain 1 96 327 - -
Gabi908g00003 711 CDD STKc_OSR1_SPAK 12 276 - -
Gabi908g00003 711 Coils Coil 666 693 - -
Gabi908g00003 711 ProSiteProfiles Protein kinase domain profile. 14 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00003 711 SMART serkin_6 14 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi908g00003 711 SUPERFAMILY Protein kinase-like (PK-like) 12 331 IPR011009 -
Gabi908g00003 711 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 96 326 - -
Gabi908g00003 711 FunFam Serine/threonine-protein kinase BLUS1 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi908g00003 Gabi-Chr908 51808 61865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi908g00003 7 702 MAP Kinase Kinase Kinase Kinase AT4G24100 68.195 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi908g00003 Pkinase 3.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi908g00003 - - gmx:100809903 1054.66