Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi903g00006 | ATGGGTTGCATAACTTCCAAGAGTTCAGCTGTAGAAGACAGCAGGGAAGGTTTGACAAAGGAATTGACATCATCTAGCAAAAGGACCTCAGAGATGAATGTTTCACGATTGAATTCTAAGAAAAGGGTCGATGGAGTTTGGGGGAAAGATAAGTTCTTGGATGGTGTTGATATGAAAGTTTCATTAATTGACAAGAAAGGAAATGGCTCAGTGCGGTTGTATGATGATCAAAATGGGAAGAAGAAAATGGAGAAACCCGAATTGAGTGTTCTTGATTATCCTGGTCTTGGAAGGGTTCCAAAGGCTTCAGAAGGAGAACAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAGGGGTGGATACCACGGAGTGCTAATACTTTTGAGAGGTTTTATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAGGCACGAGATGTGGCTCACCAAAAGATCGTTGCCTTGAAGAGGGTTCGCTTTGATAATCTTGACCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGCTGGAAGGCTTGATAACATCACAGACATCTCGTAGCTTGTACCTTGTTCTTGAATATATGGAACATGACCTTACAGGACTTGCATCAGGTCCTGGCATTAAGTTTTCTGAACCACAGGTTAAATGCTACATGCAGCAGCTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAGATTGCAGATTTTGGCTTGGCAAATTTTTTTGACCCCCATCATGGTGTTCCATTGACCAGCCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTGATTATGGAGCTGCAGTGGATTTGTGGAGCGCTGGTTGCATACTGGGGGAACTATATTGTGGCAGGCCCATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAAGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAACTGCGGTTGCAACATTCAACCATATTCAGGCCTCCACACCAATATAGGCGTTGTGTTGCAGAAACATTTAAAGAATATCCATCTACTGCCATGAGGCTTATAGAGACCCTACTTTCCGTAGATCCTGCACTTCGAGGAACAACAGCTACAGCTCTGAAGAGTGAGTTCTTTTCATCGGAACCTCTTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGACACTAAATTGCGGGAAGAAGCAACAAGAAGGCAAGGACCTGTTGGGGGAAAGGAGCAAAAAGTTGGACCAGGAGTTAGACAAGAGAAAGAACCTGGGGCATTTGTCTTATCCAAAGACAATGCTGACTCCCGCACATCAATTCAGCAGCAAGGGCAACGACTTTCAAACTCAAAGAGCCGGATTAAATTTTTCAATCCTCACAGAGAACCTGCGTCTGGATTTTTTGATTTTCGACACAAACAGTCAGAAGATATTAAAGAAATGGAAAATTATTTCTCTGGGCCTCTTATAAAGGGGCCTTCACATTCAGGTCCCTTGGTTCCAGGTTCTGGCTGGGAAAAGGTTGGAAAGGAAGCTGGTCAGTGGCTTCCTGTTTCAAACAAAGTCAACCTATCAAAACTATCTGGTTTAATGGCATCTAGGACTTTGCCCTTTGGAGATCAAGAAGAAAACCAAGTTCCGCTGAGGCCCCGAGAAACAATTCAAGTACAAAAGTCTTTGGAGTCAACTAATGGAACAGAGTCAAGAAGAAGGCATGATGAAAAACGCCAGTCTCAGAGAATTGATCTCAGTCAAATAGAAAATGGAAAGGTCTCTGCTGAAACATTGATTCAGGATGGACATGGGTCCAAGGAAAACAAGATCTATCTCTCTGGTCCATTACTGGTTTCAGCAAACAATATGGATCAGATGCTCAAAGAGCATGATCGAAAGATCCAGGAATATTCAAGACGAGCACGGATTGACAAGTCTAAAGGTGAAAAGGTTTGTGTGCATCAAAATTAG | 2109 | 0.4277 | MGCITSKSSAVEDSREGLTKELTSSSKRTSEMNVSRLNSKKRVDGVWGKDKFLDGVDMKVSLIDKKGNGSVRLYDDQNGKKKMEKPELSVLDYPGLGRVPKASEGEQVAAGWPTWLSSVAGEAIQGWIPRSANTFERFYKIGQGTYSTVYKARDVAHQKIVALKRVRFDNLDPESVKFMAREILVLRRLDHPNVIKLEGLITSQTSRSLYLVLEYMEHDLTGLASGPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLANFFDPHHGVPLTSRVVTLWYRPPELLLGASDYGAAVDLWSAGCILGELYCGRPILPGKTEVEQLHKIFKLCGSPSEDYWRKLRLQHSTIFRPPHQYRRCVAETFKEYPSTAMRLIETLLSVDPALRGTTATALKSEFFSSEPLACDPSSLPKYPPSKEIDTKLREEATRRQGPVGGKEQKVGPGVRQEKEPGAFVLSKDNADSRTSIQQQGQRLSNSKSRIKFFNPHREPASGFFDFRHKQSEDIKEMENYFSGPLIKGPSHSGPLVPGSGWEKVGKEAGQWLPVSNKVNLSKLSGLMASRTLPFGDQEENQVPLRPRETIQVQKSLESTNGTESRRRHDEKRQSQRIDLSQIENGKVSAETLIQDGHGSKENKIYLSGPLLVSANNMDQMLKEHDRKIQEYSRRARIDKSKGEKVCVHQN | 702 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi903g00006 | 702 | MobiDBLite | consensus disorder prediction | 447 | 468 | - | - | |
Gabi903g00006 | 702 | PANTHER | CELL DIVISION PROTEIN KINASE | 133 | 424 | - | - | |
Gabi903g00006 | 702 | SMART | serkin_6 | 135 | 419 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi903g00006 | 702 | FunFam | probable serine/threonine-protein kinase At1g54610 | 218 | 459 | - | - | |
Gabi903g00006 | 702 | MobiDBLite | consensus disorder prediction | 604 | 627 | - | - | |
Gabi903g00006 | 702 | FunFam | probable serine/threonine-protein kinase At1g54610 | 122 | 217 | - | - | |
Gabi903g00006 | 702 | CDD | STKc_CDK9_like | 135 | 419 | - | - | |
Gabi903g00006 | 702 | Pfam | Protein kinase domain | 136 | 419 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi903g00006 | 702 | MobiDBLite | consensus disorder prediction | 612 | 627 | - | - | |
Gabi903g00006 | 702 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Gabi903g00006 | 702 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 255 | 267 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi903g00006 | 702 | ProSitePatterns | Protein kinases ATP-binding region signature. | 141 | 164 | IPR017441 | GO:0005524 | |
Gabi903g00006 | 702 | Gene3D | Phosphorylase Kinase; domain 1 | 129 | 222 | - | - | |
Gabi903g00006 | 702 | SUPERFAMILY | Protein kinase-like (PK-like) | 128 | 425 | IPR011009 | - | |
Gabi903g00006 | 702 | Gene3D | Transferase(Phosphotransferase) domain 1 | 223 | 455 | - | - | |
Gabi903g00006 | 702 | Coils | Coil | 666 | 686 | - | - | |
Gabi903g00006 | 702 | ProSiteProfiles | Protein kinase domain profile. | 135 | 419 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi903g00006 | Gabi-Chr903 | 65639 | 71541 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi903g00006 | 127 | 452 | Core Cell Cycle Gene Families | AT5G10270 | 49.284 | 2.73e-108 | 336 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Gabi903g00006 | Pkinase | 9.8e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi903g00006 | - | K08819 | gmx:100775462 | 1097.03 |