Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi903g00006 ATGGGTTGCATAACTTCCAAGAGTTCAGCTGTAGAAGACAGCAGGGAAGGTTTGACAAAGGAATTGACATCATCTAGCAAAAGGACCTCAGAGATGAATGTTTCACGATTGAATTCTAAGAAAAGGGTCGATGGAGTTTGGGGGAAAGATAAGTTCTTGGATGGTGTTGATATGAAAGTTTCATTAATTGACAAGAAAGGAAATGGCTCAGTGCGGTTGTATGATGATCAAAATGGGAAGAAGAAAATGGAGAAACCCGAATTGAGTGTTCTTGATTATCCTGGTCTTGGAAGGGTTCCAAAGGCTTCAGAAGGAGAACAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAGGGGTGGATACCACGGAGTGCTAATACTTTTGAGAGGTTTTATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAGGCACGAGATGTGGCTCACCAAAAGATCGTTGCCTTGAAGAGGGTTCGCTTTGATAATCTTGACCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGCTGGAAGGCTTGATAACATCACAGACATCTCGTAGCTTGTACCTTGTTCTTGAATATATGGAACATGACCTTACAGGACTTGCATCAGGTCCTGGCATTAAGTTTTCTGAACCACAGGTTAAATGCTACATGCAGCAGCTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAGATTGCAGATTTTGGCTTGGCAAATTTTTTTGACCCCCATCATGGTGTTCCATTGACCAGCCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTGATTATGGAGCTGCAGTGGATTTGTGGAGCGCTGGTTGCATACTGGGGGAACTATATTGTGGCAGGCCCATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAAGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAACTGCGGTTGCAACATTCAACCATATTCAGGCCTCCACACCAATATAGGCGTTGTGTTGCAGAAACATTTAAAGAATATCCATCTACTGCCATGAGGCTTATAGAGACCCTACTTTCCGTAGATCCTGCACTTCGAGGAACAACAGCTACAGCTCTGAAGAGTGAGTTCTTTTCATCGGAACCTCTTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGACACTAAATTGCGGGAAGAAGCAACAAGAAGGCAAGGACCTGTTGGGGGAAAGGAGCAAAAAGTTGGACCAGGAGTTAGACAAGAGAAAGAACCTGGGGCATTTGTCTTATCCAAAGACAATGCTGACTCCCGCACATCAATTCAGCAGCAAGGGCAACGACTTTCAAACTCAAAGAGCCGGATTAAATTTTTCAATCCTCACAGAGAACCTGCGTCTGGATTTTTTGATTTTCGACACAAACAGTCAGAAGATATTAAAGAAATGGAAAATTATTTCTCTGGGCCTCTTATAAAGGGGCCTTCACATTCAGGTCCCTTGGTTCCAGGTTCTGGCTGGGAAAAGGTTGGAAAGGAAGCTGGTCAGTGGCTTCCTGTTTCAAACAAAGTCAACCTATCAAAACTATCTGGTTTAATGGCATCTAGGACTTTGCCCTTTGGAGATCAAGAAGAAAACCAAGTTCCGCTGAGGCCCCGAGAAACAATTCAAGTACAAAAGTCTTTGGAGTCAACTAATGGAACAGAGTCAAGAAGAAGGCATGATGAAAAACGCCAGTCTCAGAGAATTGATCTCAGTCAAATAGAAAATGGAAAGGTCTCTGCTGAAACATTGATTCAGGATGGACATGGGTCCAAGGAAAACAAGATCTATCTCTCTGGTCCATTACTGGTTTCAGCAAACAATATGGATCAGATGCTCAAAGAGCATGATCGAAAGATCCAGGAATATTCAAGACGAGCACGGATTGACAAGTCTAAAGGTGAAAAGGTTTGTGTGCATCAAAATTAG 2109 0.4277 MGCITSKSSAVEDSREGLTKELTSSSKRTSEMNVSRLNSKKRVDGVWGKDKFLDGVDMKVSLIDKKGNGSVRLYDDQNGKKKMEKPELSVLDYPGLGRVPKASEGEQVAAGWPTWLSSVAGEAIQGWIPRSANTFERFYKIGQGTYSTVYKARDVAHQKIVALKRVRFDNLDPESVKFMAREILVLRRLDHPNVIKLEGLITSQTSRSLYLVLEYMEHDLTGLASGPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLANFFDPHHGVPLTSRVVTLWYRPPELLLGASDYGAAVDLWSAGCILGELYCGRPILPGKTEVEQLHKIFKLCGSPSEDYWRKLRLQHSTIFRPPHQYRRCVAETFKEYPSTAMRLIETLLSVDPALRGTTATALKSEFFSSEPLACDPSSLPKYPPSKEIDTKLREEATRRQGPVGGKEQKVGPGVRQEKEPGAFVLSKDNADSRTSIQQQGQRLSNSKSRIKFFNPHREPASGFFDFRHKQSEDIKEMENYFSGPLIKGPSHSGPLVPGSGWEKVGKEAGQWLPVSNKVNLSKLSGLMASRTLPFGDQEENQVPLRPRETIQVQKSLESTNGTESRRRHDEKRQSQRIDLSQIENGKVSAETLIQDGHGSKENKIYLSGPLLVSANNMDQMLKEHDRKIQEYSRRARIDKSKGEKVCVHQN 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi903g00006 702 MobiDBLite consensus disorder prediction 447 468 - -
Gabi903g00006 702 PANTHER CELL DIVISION PROTEIN KINASE 133 424 - -
Gabi903g00006 702 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi903g00006 702 FunFam probable serine/threonine-protein kinase At1g54610 218 459 - -
Gabi903g00006 702 MobiDBLite consensus disorder prediction 604 627 - -
Gabi903g00006 702 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Gabi903g00006 702 CDD STKc_CDK9_like 135 419 - -
Gabi903g00006 702 Pfam Protein kinase domain 136 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi903g00006 702 MobiDBLite consensus disorder prediction 612 627 - -
Gabi903g00006 702 MobiDBLite consensus disorder prediction 1 36 - -
Gabi903g00006 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Gabi903g00006 702 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Gabi903g00006 702 Gene3D Phosphorylase Kinase; domain 1 129 222 - -
Gabi903g00006 702 SUPERFAMILY Protein kinase-like (PK-like) 128 425 IPR011009 -
Gabi903g00006 702 Gene3D Transferase(Phosphotransferase) domain 1 223 455 - -
Gabi903g00006 702 Coils Coil 666 686 - -
Gabi903g00006 702 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi903g00006 Gabi-Chr903 65639 71541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi903g00006 127 452 Core Cell Cycle Gene Families AT5G10270 49.284 2.73e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gabi903g00006 Pkinase 9.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi903g00006 - K08819 gmx:100775462 1097.03