Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi894g00015 ATGTCCCTCCTCAGCAGATTCTTCTACAAGAGACCCCCAGATGGCTTGCTCGAATTCGTCGATAGAGTATACGTTTTCGATTCCTGCTTCTCCACTGAAGCATTACCCGACGGAATGTACCAACTTTACCTTCACGAAATCGTCACCGAGTTGCACGAAGAGTTTCCAGAATCTTCTTTTCTGGCCTTCAATTTCCGCGACGGCGAGAAGCGTAGCCACTTCGCCGAGGTTCTCTGCGAGTACGATGTTACCGTTATGGATTATCCGAAGCAGTACGAGGGTTGTCCCCTTCTGCCCTTGTCTCTGGTTCAGCATTTTCTTCGCGTTTGTGAGAGTTGGCTTTCTTTGGGGAACCACCAAAACGTGATTCTCTTCCACTGTGAAAGAGGGGGTTGGCCCCTCTTGGCGTTCCTTCTTGCTAGCTTCTTAATTTTCAGAAGGGTTCACAGTGGTGAACGCAGGACCCTTGAAATGGTGCATAGAGAGGCACCTAAGGGTTTGTTGCAGCTCTTGTCACCCTTGAACCCTTTGCCTTCTCAGCTTCGTTACATTCAGTATGTGGCAAGGAGGAACATTGTTCCTGAGTGGCCACCACCAGAGAGGGCTCTGTCTCTGGATTGTCTCATTCTTAGAGGAATTCCTGGTTTTGATTCCCAGAATGGGTGCAGGCCCATGGTTAGGATTTTTGGGAGGAATTTACTTAGCAAGGGTGGGCTTTCCACTCAGATGATTTATTCCATGCGCAAGAAGAAGAAGAGCTTGAGGCATTACCGCCAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTGTTGGAGTGTGTCCACTTGGATTTGGATCTGGAAAGGGAAGTGATGATGTTTCGCGTAATGTTCAACACGGCGTTTATTCGATCCAACATATTGATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAGAGGTATCCAAAAGGCTTTCGGGCTGAGGTTTTGTATGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCCAACAACCATTTTAGATGGTGAGGAGAGAGGTGGATTGCCCATTGAAGCATTTTCAAGGGTTCAAGAACTTTTTAATGGCGTAGAATGGGTTGACAGTGGTGATGCTGCTGCTGTCTGGCTGCTTAAACAACTTACTGTCTTAAATGATGCTAAAGAGCTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTATTCGTCACCTGCTGACTCTGAAGAAGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAGGCCTTCGATGTTTTTCCTAAGTCCTCTTCTGATTCTTCAAAATTATTGACATCTGACACCCCTGATTTGGTCCATTTAGCTTTTGAGAACGGTGGTGGAAATTATGGAAATCTTACTTTAAGAACACTTGATCAGTCATTGACCGATTATATTTCAAGTAGGGAAAATTCTCCTCGTTCATCTCCACCATCGCCTTCACCAATTTCTGCTACTCAACCTCTGCTTCCAACACCAGCACAAGTGCCACCTCCTCCACCACCTCCACCTCCACCTCCACCTCCACCAATGTCTAATAAGGAGCCTTCTCTGCCTTTACCTCCGCCGCCCAATAAAGTGCCTCCTCCCCCGCCACCTCCTCTGCCACCCCTTCCTTCTCTTGGTTGTAACATTAATAATGCTAGACCTCCACATCCACCTCCTCCAAGACCTATACAGCCAAGTTTAGCTCCACCACCTCCACCTCCACCACCTCCTCCTCCTACTAGAAGCAGTAATGCCAATAGTACTCCTAGTCCACCTCCTCCAAGGCCTGTACAAACAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCGGGGCCTATACGAACAGGTTCAGCACCACCACCTCCACCTCCTCCAGGACCTGTACGAACAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCGGGACCTGTACGAACAGGTTCAGCCCCACCACCTCCACCTCCTCCGGGACCTGTACGAACAGATTCAGCCCCACCACCTCCACCTCCTCCAGGACCTGTAAGAACAGGTTCTTCCCCACCACCTCCACCTCCACTTCCTCCAGGACCTGTAAGAACAGGTTCAGCACCACCACCTCCAGGTTCTGTACGAAAAGGTTCAGCCCCACCACCTCCACCACCAGCTCCTCCAGGATCTATACGAATGGGTTCAGTTCCACCGCCAGCACCAAAGCCTCCAAGTGCTCCTCCTCCACCATCCGGTCCTGGTGCATCACCAGTGCCACCTCCATTTCCTGCAGCCAAGGCATCAGGTGTGCCACCACCCCCAAGCAAAGCTTCTTTAGCAACAGGAAATGTTGCAAGAGGTCGTGGTACTGCCATTGCTCCTAAGAAAACTTTGTTAAAGCCCCTACACTGGGTGAAAGTTGCTCGAGCAACACAAGGGAGTCTGTGGGCTGACTCGCAGAAACAAGATAATGAATCGCGGGCCCCTGAAATTGATATATCAGAACTCGAGAGCCTGTTTTCTGCAGCATCTGCTTCTGATGGGAGCAGTACTAAAGGTGGAGGTCGGCGTGGTTCTAATATCAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCAGTTTTGGCGTTGGATTCTTCTGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAAATGTTGAAGAATTATACAGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCTCGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTGAATGATTTAAGGTTACATTTAAATACAATCAATGGTGCAACCAGAGAGGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTGAATCAAGGAACAACACGGGGATCAGCAGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCCGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTGGAAGCTGCGTCTAAGATCCAACTGAAAGCATTAGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAATTGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCACTTATATCATTGTATTCCGAAGTGGGAAGAAATGCAGATTCTTTGTCTCAGTACTTTGGGGAGGATCCATCTAGGTGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAAGAAGTCAAGGGAAGAGAATGAAAGGCAGGCGGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAGGGCATCAAATAACACGCATTCCAAAAAAGATGGTGTTCGTTAG 3621 0.4637 MSLLSRFFYKRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAFNFRDGEKRSHFAEVLCEYDVTVMDYPKQYEGCPLLPLSLVQHFLRVCESWLSLGNHQNVILFHCERGGWPLLAFLLASFLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNIVPEWPPPERALSLDCLILRGIPGFDSQNGCRPMVRIFGRNLLSKGGLSTQMIYSMRKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDLEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLYGEVESISPPRAPTTILDGEERGGLPIEAFSRVQELFNGVEWVDSGDAAAVWLLKQLTVLNDAKELSRLQGKGSWYSSPADSEEENNESSTADSSDEAFDVFPKSSSDSSKLLTSDTPDLVHLAFENGGGNYGNLTLRTLDQSLTDYISSRENSPRSSPPSPSPISATQPLLPTPAQVPPPPPPPPPPPPPPMSNKEPSLPLPPPPNKVPPPPPPPLPPLPSLGCNINNARPPHPPPPRPIQPSLAPPPPPPPPPPPTRSSNANSTPSPPPPRPVQTGSAPPPPPPPPPGPIRTGSAPPPPPPPGPVRTGSAPPPPPPPPPGPVRTGSAPPPPPPPGPVRTDSAPPPPPPPGPVRTGSSPPPPPPLPPGPVRTGSAPPPPGSVRKGSAPPPPPPAPPGSIRMGSVPPPAPKPPSAPPPPSGPGASPVPPPFPAAKASGVPPPPSKASLATGNVARGRGTAIAPKKTLLKPLHWVKVARATQGSLWADSQKQDNESRAPEIDISELESLFSAASASDGSSTKGGGRRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRLHLNTINGATREVKESVKLRQIMQTILTLGNALNQGTTRGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASEIDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRNADSLSQYFGEDPSRCPFEQVTQILVVFVKMFKKSREENERQADAEKKKLEKEAMKERASNNTHSKKDGVR 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 406 449 - -
Gabi894g00015 1206 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 484 792 - -
Gabi894g00015 1206 Pfam Formin Homology 2 Domain 798 1168 IPR015425 -
Gabi894g00015 1206 SUPERFAMILY Formin homology 2 domain (FH2 domain) 868 1197 - -
Gabi894g00015 1206 Pfam C2 domain of PTEN tumour-suppressor protein 199 335 IPR014020 -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 846 861 - -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 846 866 - -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 406 420 - -
Gabi894g00015 1206 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 1169 1206 - -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 565 774 - -
Gabi894g00015 1206 Coils Coil 1074 1094 - -
Gabi894g00015 1206 Gene3D - 197 342 - -
Gabi894g00015 1206 ProSiteProfiles Formin homology-2 (FH2) domain profile. 793 1193 IPR015425 -
Gabi894g00015 1206 Coils Coil 1168 1197 - -
Gabi894g00015 1206 FunFam Formin-like protein 793 1179 - -
Gabi894g00015 1206 SMART PTEN_C2_2 198 338 IPR014020 -
Gabi894g00015 1206 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Gabi894g00015 1206 SMART it6_source 542 1203 IPR015425 -
Gabi894g00015 1206 Gene3D Formin, FH2 domain 792 1179 IPR042201 -
Gabi894g00015 1206 PANTHER FORMIN-J 696 1200 - -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 492 557 - -
Gabi894g00015 1206 MobiDBLite consensus disorder prediction 427 449 - -
Gabi894g00015 1206 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi894g00015 Gabi-Chr894 130298 139936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi894g00015 756 1177 FH2 protein (formin) Gene Family AT1G31810 76.761 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi894g00015 - - adu:107487096 862.448