Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi891g00003 ATGGAGAGTCACAATGCAGAGGTAGCGATGGGAATGGGAGGGTCAAGTGGTACTCACTCATGTTCACGATGGAGTCCTACAAAGGAGCAAATAAGCATATTAGAGAATATATATAAGCAGGGCATAAGGACACCCACAGCAGAGCAAATACAACAGATTACCACTAGGCTCAGTGTGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCATAAAGCGAGGCAAAGACAAAAGCAGAAGCAAGAAAGCATTGCATATTTCAATCGCTTTATTCATAACTCACATTCACAGCCCATTTTCTCTTCGCCAATTTGCCAAAATGTCGTCTATGCCCCATATTGCTTACAACAGAGTGAAATGAGCTTTTATCCTCAACAACCAAATGTGCTTGTAGCCGGAGGTAATGATCCAAGGACTGAGAAAGTTGTGCCCATGGGGATGCCAAAAATCTGTTATGGCCCGCAGATATACGAACAATTGCAACAGAGAATCCCTGATTACAACTTCAGCAACAGTAACCAAGAAACGTTGACTCTCTTTCCTCTTCACCCAACCGGCATTTTGGAAAGTAAAACAACAGACAAAGTGCCTTATGTTGCTTCAATTGCTGCTGATAGTTCCACTGATATAGATGAAGATGGTCGTCCCGGAAACCAATTGTTCGTTGATTTTTTTACCTCTGTTCAAGGGTCTCGAGAGAGTGATTAG 720 0.4236 MESHNAEVAMGMGGSSGTHSCSRWSPTKEQISILENIYKQGIRTPTAEQIQQITTRLSVYGHIEGKNVFYWFQNHKARQRQKQKQESIAYFNRFIHNSHSQPIFSSPICQNVVYAPYCLQQSEMSFYPQQPNVLVAGGNDPRTEKVVPMGMPKICYGPQIYEQLQQRIPDYNFSNSNQETLTLFPLHPTGILESKTTDKVPYVASIAADSSTDIDEDGRPGNQLFVDFFTSVQGSRESD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi891g00003 239 SUPERFAMILY Homeodomain-like 19 90 IPR009057 -
Gabi891g00003 239 ProSiteProfiles 'Homeobox' domain profile. 17 82 IPR001356 GO:0003677
Gabi891g00003 239 CDD homeodomain 23 83 IPR001356 GO:0003677
Gabi891g00003 239 Gene3D - 21 89 - -
Gabi891g00003 239 FunFam WUSCHEL-related homeobox 4 21 88 - -
Gabi891g00003 239 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 198 IPR044555 GO:0003700|GO:0099402
Gabi891g00003 239 Pfam Homeodomain 22 81 IPR001356 GO:0003677
Gabi891g00003 239 SMART HOX_1 19 86 IPR001356 GO:0003677
Gabi891g00003 239 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi891g00003 Gabi-Chr891 25765 26991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi891g00003 15 230 Wox Gene Family AT5G59340 43.089 5.33e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi891g00003 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi891g00003 - - pvu:PHAVU_011G064900g 269.626