Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi884g00003 ATGATGTTTGATGACATGGGGTTTTGTGGCGATTTGGATATGTTATGTGGTCCACTCGGGGAAGAAGATATTTCTGCCAGGCAAACTGAACCCGATGCAGGAGTTGATGATGATTACAGTGATGAAGAAATTGATGTGGATGAGCTTGAGAGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAACAAACTAAGGCTAAGGAAGGAATTGATGCAGCAAAGCAAAGGCAATCCCAAGAACAGGCAAGGAGGAAGAAGATGTCAAGAGCTCAGGATGGGATACTGAAATACATGCTGAAGATGATGGAGGTTTGTAAGGCGCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCAGTGACTGGGGCATCTGACAACCTTCGTGAATGGTGGAAGGATAAGGTTAGGTTTGATCGGAATGGTCCAGCTGCCATAGCCAAGTATCAAGCGGATAATGCAATCCCTGGGAAGAATGATGGATGCAATTCGATTGGTCCAACTCCGCACACCTTGCAAGAGTTACAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTTATGCAGCACTGTGATCCCCCTCAGAGACGGTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCAACCGGGAATGAAGAATGGTGGCCTCAAATTGGTTTACCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTGAAGAAGGCATGGAAGGTTGGTGTTCTAACTGCAGTTATCAAGCATATGTCTCCTGATATTGCCAAGATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCAACCTGGCTTGCCATCATCAATCAAGAGGAGTCCTTGGCTCGAGAGCTTTATCCTGAGTATTGCCCCCCATTGTCCTCTGCTGGAGGCAGTGGGTCATTGGTCATCAATGATTGCAATGAGTATGATGTTGAAGGGGCTGAGGATGAGCCAAACTTTGATGTGGAAGACAGGAAACCCGAGAATCTTCTTCCATCCAATCTTGGGATGGAGAGAATGAGGGGAAGGCTTTCAGTTCAGCAACCATCTCATCCAATCAAGGGAGAGGTTGTTACAAACTTGGATTTTATTAGGAAGAGGAAGATCTCAAGTGAGTTTAGCATGATGATGGATCAGAAAATTTACACATGTGAACATCCTCAGTGCCCTTACAGTGAAGTTCGCCTTGGTTTTCAAGACAGGTCTTCTAGGGACAATCATCAATTGAATTGTTCGTATAGAAGCAGTTCTGCAGATTATGGTGTTCCCAATTTTCATGCTACTGAGGTTAAGCCAGTAATATTCCCCCAGTCATTTGTTCAACCCAATACTACATCTCAGTGTGCTAGTTTGGTTCCACCTACATTTGATCTAACTGGGCTTGGAGTTCCGGAGGATGGCCAAAAAATGATTAGCGACCTAATGTCAATCTATGATACAAATGTTTTAGGGAACAAGAACGTAGGTTCCACTAACTGTGTAGCTGCAGAAAATCAAAACTTTCTTCAGCCCAGCATTCAGCAACCACAGGAGAATTTCTTTCCTGGCCAAGGAATGGTAATGGAAGGTAACTTCTTTGCACGAGAGGAAGGTCAATTTGACCGGTTCAAGAATATGAACTCTCCTTTTGAGACCAACCACAACAACAATAATATCCCTTTGATGTTTGGCTCCCCATGTGATTTGGCATCGTTTGATTTTAAGGAAGATAATCAAGTAGTAGGGATGGATACTCTTCACAAACAGCCAGATGTTTCAGTATGGTACCAGTGA 1821 0.4443 MMFDDMGFCGDLDMLCGPLGEEDISARQTEPDAGVDDDYSDEEIDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPEYCPPLSSAGGSGSLVINDCNEYDVEGAEDEPNFDVEDRKPENLLPSNLGMERMRGRLSVQQPSHPIKGEVVTNLDFIRKRKISSEFSMMMDQKIYTCEHPQCPYSEVRLGFQDRSSRDNHQLNCSYRSSSADYGVPNFHATEVKPVIFPQSFVQPNTTSQCASLVPPTFDLTGLGVPEDGQKMISDLMSIYDTNVLGNKNVGSTNCVAAENQNFLQPSIQQPQENFFPGQGMVMEGNFFAREEGQFDRFKNMNSPFETNHNNNNIPLMFGSPCDLASFDFKEDNQVVGMDTLHKQPDVSVWYQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi884g00003 606 MobiDBLite consensus disorder prediction 21 42 - -
Gabi884g00003 606 MobiDBLite consensus disorder prediction 66 90 - -
Gabi884g00003 606 Gene3D - 171 304 IPR023278 GO:0003700|GO:0005634
Gabi884g00003 606 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 589 IPR006957 GO:0003700|GO:0005634
Gabi884g00003 606 FunFam Ethylene insensitive 3-like 1 79 157 - -
Gabi884g00003 606 SUPERFAMILY DNA-binding domain of EIN3-like 173 297 IPR023278 GO:0003700|GO:0005634
Gabi884g00003 606 Gene3D - 79 156 IPR023278 GO:0003700|GO:0005634
Gabi884g00003 606 Pfam Ethylene insensitive 3 47 294 IPR047091 GO:0003700
Gabi884g00003 606 FunFam Ethylene insensitive 3-like 1 167 304 - -
Gabi884g00003 606 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi884g00003 Gabi-Chr884 29227 32758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi884g00003 1 605 EIL Transcription Factor Family AT3G20770 61.385 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Gabi884g00003 EIN3 2.8e-131 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi884g00003 K14514 - gmx:100798037 1113.21