Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi874g00001 ATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCTGGCAGTGTATGAGGAAGCTGATTGCTCTCATCTGGTGATGGAATTGTGCTCTGGGGGAAAACTTGTCGACCAGATGTTTAGGGAGGGCACTTGTTCTGAACAGCGGGCTGCTAATATACTTAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTGCTTACTGCTTCGGGGGAAATAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCTAAGGGTCAGAACTTGACGGGTTTGGTTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGATTGGTTTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGAGTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTTCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCTTCATCATCTGAAAGTTGTAATTCAGAATATCATAATGTTTGTGTGTGGATTGATGCACTTGCCAATGCAATTTCACATGTAAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGCAGTTCCAATTCATCAGCAAGATGGTAGCGAGGAGTTTGACCTTGAGTCAATTATATATAGCAATGGCGTTTACTTTGAAAATGGAGTTGACAGCTGCTTGCTTATTTTCACTGAAAAAAAAAGGAAAAAAAAGTACAGCTACTTGTGTTTAGAAGAGGCGAATCTTAACTACCGGGGGATAGATTTTGAAAGGCTATAA 1086 0.4273 MQHLSGHPGVVTLLAVYEEADCSHLVMELCSGGKLVDQMFREGTCSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGEIKLADFGLAMRISKGQNLTGLVGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLIGFLPFKGDSQEAVFEAIKNSKLEFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAACHNFVAAPEPRLGRNRMDDGFLNEVSSLSSSSESCNSEYHNVCVWIDALANAISHVRISEPKRSKLWAVPIHQQDGSEEFDLESIIYSNGVYFENGVDSCLLIFTEKKRKKKYSYLCLEEANLNYRGIDFERL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi874g00001 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Gabi874g00001 361 Gene3D Transferase(Phosphotransferase) domain 1 1 243 - -
Gabi874g00001 361 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi874g00001 361 FunFam Maternal embryonic leucine zipper kinase 2 226 - -
Gabi874g00001 361 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi874g00001 361 SUPERFAMILY Protein kinase-like (PK-like) 2 241 IPR011009 -
Gabi874g00001 361 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 230 - -
Gabi874g00001 361 Pfam Protein kinase domain 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi874g00001 Gabi-Chr874 1222 3648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi874g00001 1 219 EF-hand Containing Proteins AT1G50700 46.396 6.02e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi874g00001 Pkinase 5.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi874g00001 - - gmx:100812729 459.529