Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi871g00003 ATGCCAACCGTGGCCGTTAAGCTCTATAGTGTGTTCTTCAAGTTTCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAGCCCCGCCCGAAGAATCCAACCCGTTTGGCGTCACATCTCGACCCGACGAATCCGTCGCCGCCGCGAACCCTTCTTTCTCCGACGGAGTCGCCACCAAGGATATCCATATCGACCCCTTCACTTCCCTCTCTATACGAATTTTTCTTCCCGAATCCGCACTCACCCCAAATGTGGAGGGTTTGAATTTGATGGCCGGCGGCGTGTACGGAGGCTACTCGCCTGCGATGGATAATCGCCGGAGAAAACTACCGGTAATGATGCAGTTTCACGGCGGAGGTTGGGTGAGCGGGAGCAACGACTCTGTCGCCAATGACTTCTTCTGCCGGCGGATCGCGAAGCTATGCGACGTAGTTGTAGTTGCCGTTGGGTACCGGCTTGCGCCGGAGAATCGGTACCCGGCGGCGTTCGAGGACGGGTTTAAGGTGATGAATTGGTTGGCGAAACAGGCGAATTTGGCGGAGTGTAGCAAATCCATGGGGATCAAGAAATTGGATGGTAATAATAGGCATATTGTTGATTCCTTTGGAGCTTCAATGGTTGAACCATGGTTGGCTGCTCATGGAAATCTATCAAGGTGTGTTCTTCTAGGCGTGAGTTGTGGTGCAAATATTGCAGACTTCGTGGCTCGAAAAACTTTAGAAGCAGGCAAGCTTCTGGACCCTGTCAAGGTGGTGGCACAGATCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCGCTCTGAAATAAAATTGGCAAACTCTTACTTTTATGACAAGGGTATGTGTATGCTAGCATGGAAACTATTCCTACCTGAGGAAGAATTTAGCCTGGACCATCCAGCTGCCAATCCCCTAGTCTCAGGCCGGGGTCCTCCTTTAAAACTCATGCCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGGGATCGTGCTATTGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTCCATGAATTTGCAACACTTGACGTACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGATATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTCATGAATTCTCATATTGA 1191 0.4979 MPTVAVKLYSVFFKFLLKHRLQNRIQAPPEESNPFGVTSRPDESVAAANPSFSDGVATKDIHIDPFTSLSIRIFLPESALTPNVEGLNLMAGGVYGGYSPAMDNRRRKLPVMMQFHGGGWVSGSNDSVANDFFCRRIAKLCDVVVVAVGYRLAPENRYPAAFEDGFKVMNWLAKQANLAECSKSMGIKKLDGNNRHIVDSFGASMVEPWLAAHGNLSRCVLLGVSCGANIADFVARKTLEAGKLLDPVKVVAQILMYPFFIGSVPTRSEIKLANSYFYDKGMCMLAWKLFLPEEEFSLDHPAANPLVSGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi871g00003 396 SUPERFAMILY alpha/beta-Hydrolases 45 387 IPR029058 -
Gabi871g00003 396 Pfam alpha/beta hydrolase fold 112 361 IPR013094 GO:0016787
Gabi871g00003 396 Gene3D alpha/beta hydrolase 29 391 IPR029058 -
Gabi871g00003 396 PANTHER ARYLACETAMIDE DEACETYLASE 52 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi871g00003 Gabi-Chr871 21190 24952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi871g00003 1 396 Carbohydrate Esterase AT3G27320 74.766 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi871g00003 - - gmx:100775445 676.396