Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi870g00003 ATGTCGGACGAGGAACACCATTTTGAGTCCAAGGCTGATGCCGGAGCCTCCAAGACCTATCCTCAGCAAGCTGGCACCATTCGCAAAAACGGTTACATCGTCATCAAGGCTCGCCCCTGCAAGGTTGTTGAAGTTTCAACTTCCAAGACTGGTAAGCATGGTCATGCTAAGTGCCACTTTGTTGGAATTGATATTTTCACTGGCAAGAAGCTTGAAGATATTGTGCCCTCTTCCCACAATTGTGATGTATGCACTTTTTATTATGTTTCATCGTTCTTCAGTTCTGTGAGCCTGCTTACTGATAATGGTGGCACCAAGGATGACCTGAGGCTTCCAACTGATGAGAGTCTGCTTACTCAGCTTCAAAGAATCAGCTTCTTCGTTCTGTCTTTGAGGGAATGA 402 0.4577 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVCTFYYVSSFFSSVSLLTDNGGTKDDLRLPTDESLLTQLQRISFFVLSLRE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi870g00003 133 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 122 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gabi870g00003 133 SUPERFAMILY Nucleic acid-binding proteins 95 123 IPR012340 -
Gabi870g00003 133 MobiDBLite consensus disorder prediction 1 20 - -
Gabi870g00003 133 Gene3D - 92 125 IPR012340 -
Gabi870g00003 133 Gene3D - 1 84 IPR014722 -
Gabi870g00003 133 NCBIfam translation initiation factor IF-5A 17 113 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gabi870g00003 133 PIRSF Transl_init_eIF5A 1 126 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Gabi870g00003 133 SUPERFAMILY Translation proteins SH3-like domain 15 83 IPR008991 -
Gabi870g00003 133 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Gabi870g00003 133 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi870g00003 Gabi-Chr870 55552 56661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi870g00003 1 122 Eukaryotic Initiation Factors Gene Family AT1G13950 77.344 3.87e-65 193