Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi864g00005 ATGGGTAGCATAGAACTAGTTGAGAAAGTTGTAATTGTTCCTGATCAACCAACACCCTCTAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTTCCAAGATTCTGCCTCCTTTTTTGATCCTCCAAGTAGCCAAATGAGCTTTTCTTATATTTGTAGCAAATTTTACAGTGCACTTAGCAAAATGCTTGTGCATTATTACTTTATGGCTGGTAGGCTAGTGCCAAGTTTGGAGGAGAATCATCGGTTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTGCTGCTGCAAAAACTACTAAGAAATTGAGTGACTTTGGTGTTATTTCTGCACCTAATCCCGAGTTAAGGGAATTAGTTGTTTTCTTACATGAAGAGGGCAAAGAAGAAACTGACCTGAAAGAAAAGCCCCTTGTATCCTTACAGCTAACACAGTTTGGATGTGGAAGTTTGGCACTTGCTTCTCACTACAACCATTGCACACTGGATGGGATATCAGTAAGAGATTTTGAGGTGAATTTGGCTGCATTAACGAGTGGTGATGACCTCATTGTAGTACCTAATGCAGATAGGACACTGCTAAGAGCTAGAAACCCTCCAATGATAAGTCATCCACATTTTGAGTATTCAAAATCTTCTGACACAGAGAACTCTTTCACTATCCGTGGTACAAGTGGTACAAATGTTAGACAATCCATGGCAGATAATCAAATTCATATGCTTTATTTATCACCACAACAAATTGCCAGCTTCAAAAAGAAAGCTCTCAAGGATAGCAACTTGAAGACCAGCACCACTTTTCAAGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGTATTGCAACAAAGATGCCAAAAGATAAAGTATCCACAATGTTGTTCCCAGTAGATGTTAGGAAAAGGATTGTTCCTGAACTTCCAAATGGGTTTGCAGGTAATGCATTGGTTCCTGGCTTTGCAAGAGCAACTGTGAAGGAGCTCATGGAATTAGAAGATGCTTGTCACATAAGGAAAGTGCAAGAAGGGATTGAAAGATTGGATGATGAGTACATTAAGTCAGGTATAGATTGGTTAGAGGTGAATAAAGGGTTTCCTTGCAATGATGATAGTTTCTCCTTGGTTGCATGGTGGAGATTGGGCCTAGAGGAGCAACTTTTTGCATGGGGTAAACTAAAATGTGCCACTCCACTTGCAGTTAAGCCTGGTTTGGTCATGCTTTTGCCAGGGTCACAACATGAAGGAGGTCTTAATATATGCCTTGATTTACCTGAGGATCAAATGCAAGAGTTTTGTAGGTTAATGCTAGAAATTTAG 1323 0.3968 MGSIELVEKVVIVPDQPTPSKRMFLSNIDLSLVVFQDSASFFDPPSSQMSFSYICSKFYSALSKMLVHYYFMAGRLVPSLEENHRFEIDCNDAGIVVAAAKTTKKLSDFGVISAPNPELRELVVFLHEEGKEETDLKEKPLVSLQLTQFGCGSLALASHYNHCTLDGISVRDFEVNLAALTSGDDLIVVPNADRTLLRARNPPMISHPHFEYSKSSDTENSFTIRGTSGTNVRQSMADNQIHMLYLSPQQIASFKKKALKDSNLKTSTTFQVVAAKIWKARSIATKMPKDKVSTMLFPVDVRKRIVPELPNGFAGNALVPGFARATVKELMELEDACHIRKVQEGIERLDDEYIKSGIDWLEVNKGFPCNDDSFSLVAWWRLGLEEQLFAWGKLKCATPLAVKPGLVMLLPGSQHEGGLNICLDLPEDQMQEFCRLMLEI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi864g00005 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 430 - -
Gabi864g00005 440 Pfam Transferase family 3 433 - -
Gabi864g00005 440 Gene3D - 229 440 IPR023213 -
Gabi864g00005 440 Gene3D - 2 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi864g00005 Gabi-Chr864 77295 78750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi864g00005 4 440 Monolignol Biosynthesis Gene Families AT5G48930 27.679 2.46e-58 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi864g00005 K15400 - gmx:100801822 734.561