Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi862g00001 ATGGGCGTCAATTCCTTGCCATCGGAGGAATCCACCCTCGATCTTGACGAGCAGATCTCACAGCTCATGCAGTGCAAGCCACTCTCTGAGCAACAGTGTCCAGATACTAATTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTTCTTGTGGCACTGAAAGTACGGTATTCTCAGCGAATTACTATTCTCAGGGGAAACCATGAAAGCCGTCAGATCACTCAAGTATATGGATTTTACGATGAATGCTTAAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTCTTTCCATTGACTGCATTGGTTGAATCCGAAATATTTTGTTTGCATGGTGGACTATCACCTTCAATTGAGACCCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGACAGATGTGGCTGGGGAATTTCTCCTCGGGGTGCAGGGTATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACAAGCTTAAGTTGATTGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAGAAGGTGGTTACCATTTTTAGTGCTCCTAACTACTGTTATCGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTCCAAGGGCCACACATTTATCCAGTTTGAACCTGCTCCCAGGAGAGGAGAACCTGACGTCACCCGGAGAACACCTGATTACTTCTTATGA 804 0.4341 MGVNSLPSEESTLDLDEQISQLMQCKPLSEQQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYSQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNKLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFEPAPRRGEPDVTRRTPDYFL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi862g00001 267 Pfam Calcineurin-like phosphoesterase 32 200 IPR004843 GO:0016787
Gabi862g00001 267 Gene3D - 13 267 IPR029052 -
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 38 65 IPR006186 GO:0016787
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 213 229 IPR006186 GO:0016787
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 106 132 IPR006186 GO:0016787
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 135 162 IPR006186 GO:0016787
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 191 211 IPR006186 GO:0016787
Gabi862g00001 267 PRINTS Serine/threonine phosphatase family signature 71 95 IPR006186 GO:0016787
Gabi862g00001 267 MobiDBLite consensus disorder prediction 248 267 - -
Gabi862g00001 267 CDD MPP_PP2A_PP4_PP6 14 251 - -
Gabi862g00001 267 SUPERFAMILY Metallo-dependent phosphatases 15 252 IPR029052 -
Gabi862g00001 267 SMART pp2a_7 6 251 IPR006186 GO:0016787
Gabi862g00001 267 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 15 267 IPR047129 GO:0004722
Gabi862g00001 267 ProSitePatterns Serine/threonine specific protein phosphatases signature. 72 77 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi862g00001 Gabi-Chr862 39723 50409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi862g00001 14 197 Calmodulin-binding Proteins AT5G63870 31.818 2.28e-24 97.4