Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi860g00003 ATGAGGAACTGTGAGTTGTGCAAAGTTCCGGCGAGGACCTTCTGTGAGTCAGACCAGGCAAGCTTATGCTGGGACTGCGACGCCAAGGTACACGGTGCAAATTTCTTGGTCGCAAGGCACTCCAGGACCCTTCTCTGCGACGCGTGCCGCTCCCCGACGCCGTGGAAAGCCACCGGCGCTAGGCTCGGCAACACCGTCTCCGTCTGCGAGCGTTGCGCCACCGGAACTACCGGAGAAGAAGCAGAGGAGAGTGAAGGAGACAATGACGACGATGTAGACACGGAGGACGACGACGATTTTTCCGGCGGCGAAGACGGAGACAATCAGGTGGTGCCGTGGTCCTTGACGTCACCTCCGCCGGCGGCGAGTTCCTCCAGCAGTGAATGTTCATCGGCTAGCTGGTGTAACGACAACGGCGATGGATCTGTTTCTGAACCTGTAACGACAGCAACCTCGTTGAAACGACAGCGTGAGGATGATGCTTCGGATCGTGATCTCCAGGAGGGTTCGAACAGTTCGGCATCTCAACGGAGGTGCGGTGGAGAGTGGAGAGAGGAGGTGGTGAGCGGCGGAGAACCGCCGTCGAAGGAGTGGCCGAGGCCGCATGGTAGAGCATCTGCCGGCATTTAA 630 0.5905 MRNCELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHSRTLLCDACRSPTPWKATGARLGNTVSVCERCATGTTGEEAEESEGDNDDDVDTEDDDDFSGGEDGDNQVVPWSLTSPPPAASSSSSECSSASWCNDNGDGSVSEPVTTATSLKRQREDDASDRDLQEGSNSSASQRRCGGEWREEVVSGGEPPSKEWPRPHGRASAGI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi860g00003 209 MobiDBLite consensus disorder prediction 152 166 - -
Gabi860g00003 209 MobiDBLite consensus disorder prediction 80 104 - -
Gabi860g00003 209 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gabi860g00003 209 CDD Bbox1_BBX-like 4 45 - -
Gabi860g00003 209 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gabi860g00003 209 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 175 - -
Gabi860g00003 209 MobiDBLite consensus disorder prediction 110 151 - -
Gabi860g00003 209 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Gabi860g00003 209 MobiDBLite consensus disorder prediction 75 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi860g00003 Gabi-Chr860 66053 67245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi860g00003 2 73 C2C2-CO-like Transcription Factor Family AT4G27310 72.222 4.14e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi860g00003 zf-B_box 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi860g00003 - - vun:114168631 188.348