Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi850g00001 ATGCAGCATAGACAGATAGTGAATCTGATGGAATGGCAGAAACAGGTTCAGAATGAGAATGTTGATGCCAACAATGGGAAGGTTATAATGACTGACGAGCAGTTGGAAACTCTAAGTAAACAAATTGCCAACAATGGGAAGATTATTATGACTAATGAGCAGTTGGAAACTCTGAGGAAACAAATCGCAGCTTATGCCAACATTTCAGAGCAACTACTTCAGAAGCACAAAACACTCTCAGTTCAGTTTACCGAGCAGAAACCTAGTGGAATAGTGGGAGATATATGCAGTGACCCATTAACCCACAAGAGGTGGACTCCAACACTCAAGCAGCTTCAGATTCTTGGGCGAATATTTGAGGAGGGGAAAGGGATGGGAATTACAAACAAGGAAAAAATCAAGGAGATAACTACTGAACTGAGCCAGCATGGCCAAATATCTGAAAGTAATATTTATAATTGGTTTCAGAACAAGCGAGCTCGACTGAAAAGAAAACAGCATAAGTAG 507 0.4063 MQHRQIVNLMEWQKQVQNENVDANNGKVIMTDEQLETLSKQIANNGKIIMTNEQLETLRKQIAAYANISEQLLQKHKTLSVQFTEQKPSGIVGDICSDPLTHKRWTPTLKQLQILGRIFEEGKGMGITNKEKIKEITTELSQHGQISESNIYNWFQNKRARLKRKQHK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi850g00001 168 Pfam Homeodomain 103 164 IPR001356 GO:0003677
Gabi850g00001 168 SUPERFAMILY Homeodomain-like 101 166 IPR009057 -
Gabi850g00001 168 PANTHER WUSCHEL-RELATED HOMEOBOX 13 49 167 IPR044559 GO:0003700
Gabi850g00001 168 Coils Coil 55 75 - -
Gabi850g00001 168 Gene3D - 104 168 - -
Gabi850g00001 168 SMART HOX_1 100 168 IPR001356 GO:0003677
Gabi850g00001 168 CDD homeodomain 103 166 IPR001356 GO:0003677
Gabi850g00001 168 ProSiteProfiles 'Homeobox' domain profile. 98 165 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi850g00001 Gabi-Chr850 3126 4295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi850g00001 9 167 Wox Gene Family AT4G35550 48.214 2.99e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi850g00001 Homeodomain 3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi850g00001 - - rcu:8281315 149.058