Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi849g00004 ATGGCATACAACGCTGATGATGTCTCTGTTTCTTTAACCAAGAAGAGGAAGATTTCTGAAGAAACTCATGTTGCTGCAAAAAAGAAGGTGTGTGTAGAGAGAAGTTGGGGTTACTCTTTGGATTTGATGCTTTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAATGGCAGTGATCTTGGCAACATGAGGAGGCTCTTGCTCCCTAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAAAGAGGTGTTCAAGTTGAGATTTGGGATGTAAACACTACCTCTATTCATTCTTTAATTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGAAATTGGGTTAAAGATTTTGTATCAAGAAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCATTGGGATCCATACAAAAATCGCTTTAATTTTTCTGTTCTTTATGCCTTTTAG 471 0.3885 MAYNADDVSVSLTKKRKISEETHVAAKKKVCVERSWGYSLDLMLYDDPWKIKKVLNGSDLGNMRRLLLPKDFAENLVVPVLDGDVERGVQVEIWDVNTTSIHSLIFKKWVSSRSYVFIGNWVKDFVSRRGLKKGDEIGLHWDPYKNRFNFSVLYAF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi849g00004 156 SUPERFAMILY DNA-binding pseudobarrel domain 47 146 IPR015300 -
Gabi849g00004 156 CDD B3_DNA 49 153 IPR003340 GO:0003677
Gabi849g00004 156 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 26 154 - -
Gabi849g00004 156 Gene3D - 48 152 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi849g00004 Gabi-Chr849 20091 20561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi849g00004 51 142 B3 DNA Binding Superfamily AT3G24650 31.522 1.12e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi849g00004 - - lang:109331497 187.578