Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi836g00001 ATGGATCAACTGGGAAATAAACCTCCTTCTTCTTCAACCAAGGTTGAAAGAAGGGTCATAGAGAAAAGCAGAAGAAACCATATGAAGATGCTTTACTCCAAACTCAATTCTCTTCTTCCTAACTATAACCCCAAGTTGTTGCAGGAAGCGTTACCATTAATTGACCAAGTAGATGAGGCAATCAAATACATAAAGATCCTAGAAGGGAAGGTGAAGATGGCTCAAGAGAAGAAAGAGAGCTTAGGGGAAAAGAAGAGATCACGTAGTTGCTGCTCTAGTTCTTCTGCTACAACTAGCTGCCCAAAATCGCCACAGCTTGAAGTTCACGAAATGGGTTCTTGTCTAGAACTTGTTCTGACTTGTGGGTTAGAAACCCGGTTCATTTTCTATGAAATCATTCGCATACTTCATGAAGAGAACATAGAGGTCAAGACTTCTGCCAATTCCTCACTGGCCGGAGATTCAATGCTTCATGTTGTGCATGCTGAGATTCCTCAATCTTATCTTCAGTTTGGAGTGACCAAAGTAAGCGAGAGATTGAAGAAGTTTGTGAATGTATCGTCAAGTGATATGAAAATACCGCTCGATTGGAGGGATTTTGAAATCGATACTAATTTGTGGGGCTTCTAG 630 0.4095 MDQLGNKPPSSSTKVERRVIEKSRRNHMKMLYSKLNSLLPNYNPKLLQEALPLIDQVDEAIKYIKILEGKVKMAQEKKESLGEKKRSRSCCSSSSATTSCPKSPQLEVHEMGSCLELVLTCGLETRFIFYEIIRILHEENIEVKTSANSSLAGDSMLHVVHAEIPQSYLQFGVTKVSERLKKFVNVSSSDMKIPLDWRDFEIDTNLWGF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi836g00001 209 MobiDBLite consensus disorder prediction 78 99 - -
Gabi836g00001 209 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 184 - -
Gabi836g00001 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 67 IPR011598 GO:0046983
Gabi836g00001 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 87 IPR036638 GO:0046983
Gabi836g00001 209 Gene3D - 6 94 IPR036638 GO:0046983
Gabi836g00001 209 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi836g00001 Gabi-Chr836 34135 39601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi836g00001 12 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.462 6.13e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gabi836g00001 HLH 0.00029 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi836g00001 - - gmx:100817883 263.848