Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi81g00004 ATGGAAGGCAATAATGGTAAAGGAGAGGAGATTGTGGATGTTGGATCGGTGGTTGAAGCTGTTTCTGCTGACGACGGCGCCGCTCCTCTTTACAACCTCGAAAGCCTCTGCATGCGTTGTGGCGAAAACGGGATTACAAGATTTTTATTAACTCTAATTCCTCACTTCAGAAAGATTTTGTTGTCGGCTTTTGAATGTCCTCACTGTGGGGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTTGTTACTCTCTGAAGATCCCATCAGGCGAACAGAAGATGCTCAATCGAAAAGTGGTAAAATCAGAGTCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTAATGCGTGCTGCTGATGAACTTCAGGCACTTCAAGAGGAACGCAAAAAAGTGACTCCAGAGACAGCTGAAGCGATTGATAGGTTTTTGGTGAAATTGCGAGCCTTTGCAGCAGTAGAATATTCCTTCATGTTTATTCTTGATGATCCTGCTGGGAACAGCTTCATTGAAAACCCGTTCGCACCATCATCTGATCCATCACTGACTATCCAATTTTATGAGCGAACTCCGGAGCAACAAGCATCACTGGGATATCTGGTTGATTCTACACAAATTGAAGGAACTCATGATGAAGCACCACAAGGGGGAGAAGCAGTGGCTGCTGATCGAGTGAGGAGAGAACCACATGGGTCTGTAGGGGCAGCAGCTGGTCATCGAGCCATTGCTCAGAGTAATAGTGCAGAAATTGCAGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTACTTGTGCCACTATGTGCGAGACCCGAATGTTTGTCACCAAAATTCCATACTTCCAAGAAGTTATTGTTATGGCATCTACATGTGATGCTTGTGGTTACCGCAACTCTGAGTTGAAACCCGGTGGACGGATTCCTGACAAAGGAAAAACGATTACTCTTTATGTGAAGAATGTTAATGACCTGAGCCGCGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGACTTGGAGCTGGCAAGTGGCACCCTTGGAGGAATTGTTACAACTGTTGAAGGTTTAATAACAAAAATTTGTGAAAGCATTGAGAGCATCCATGGGTTTACTTTTGGAGATAGTCTTGATGAACAAGGAAGAAGCAAGTGGCTACGCTTTAAAGCAAGGCTAAACAAGCTTCTGAGCTTGGAGGAACCTTGGACTCTAATTCTGGATGATGCATTAGCCAATTCTTTTGTAGCACCTGTAACTGCTGATCTAAAAGACGACAATCAATTAAGAATTGAGGAATATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGTCTGAATGATATGGATACCTCTTCTGCCGATGTTGCTTATGAATCAGCAAATGCTACTAAAATTGAGTGA 1503 0.4358 MEGNNGKGEEIVDVGSVVEAVSADDGAAPLYNLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLKIPSGEQKMLNRKVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVTPETAEAIDRFLVKLRAFAAVEYSFMFILDDPAGNSFIENPFAPSSDPSLTIQFYERTPEQQASLGYLVDSTQIEGTHDEAPQGGEAVAADRVRREPHGSVGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGTCATMCETRMFVTKIPYFQEVIVMASTCDACGYRNSELKPGGRIPDKGKTITLYVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKICESIESIHGFTFGDSLDEQGRSKWLRFKARLNKLLSLEEPWTLILDDALANSFVAPVTADLKDDNQLRIEEYERSWEQNEELGLNDMDTSSADVAYESANATKIE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi81g00004 500 Coils Coil 131 151 - -
Gabi81g00004 500 Gene3D ZPR1, A/B domain 337 479 IPR042451 -
Gabi81g00004 500 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Gabi81g00004 500 FunFam zinc finger protein ZPR1 81 222 - -
Gabi81g00004 500 SMART zpr1 35 195 IPR004457 GO:0008270
Gabi81g00004 500 SMART zpr1 291 451 IPR004457 GO:0008270
Gabi81g00004 500 FunFam Zinc finger protein ZPR1 337 479 - -
Gabi81g00004 500 FunFam Zinc finger protein ZPR1 282 336 - -
Gabi81g00004 500 PANTHER ZINC FINGER PROTEIN ZPR1 17 493 IPR040141 -
Gabi81g00004 500 FunFam Zinc finger protein ZPR1 25 80 - -
Gabi81g00004 500 Gene3D ZPR1, zinc finger domain 28 80 IPR042452 -
Gabi81g00004 500 Gene3D ZPR1, zinc finger domain 281 336 IPR042452 -
Gabi81g00004 500 Pfam ZPR1 zinc-finger domain 291 449 IPR004457 GO:0008270
Gabi81g00004 500 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Gabi81g00004 500 NCBIfam ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Gabi81g00004 500 NCBIfam ZPR1 zinc finger domain 292 483 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi81g00004 Gabi-Chr81 119787 130208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi81g00004 5 499 C2H2 Transcription Factor Family AT5G22480 73.387 0.0 756