Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi818g00002 ATGGGTACCCTGGAGATGTTCAAAGGATATAGCAAGGTAGAAGAAGATCACCACCACCTCGAAGATCAACGGCAACAGCAACGACACTCAAAAATATGCAAACCCCTCACCGCCACCTTTTCCATCTTCGCTATGGTATTCCTCACTCTCACCATAGCTTTCGCCCTCGCAACCCTCATTCACCACGTCAACACCGAGTCACCGGAAGAAGAACCTCTCAACTCGGCCGAGTCAATCCGAGCCGTATGCAACGTGACTCGCTTCCCCGACTCGTGCTTCTCCGCCATATCTTCCTCCACCCAAAACCCCACCGACCCAGAAGCGATTCTCAGGCTATCCCTGCGCGTGACGGTCGACGAGCTCAGCAAGGTCGCGTCTTCGCTCAGAGCCATGGCTTCCAACTCCAAGGGTTCCGCACTGGTGGATTGCAAGGACCAGATGGACGACGCGCTGAGTCGACTCAATGACTCGCTGTCGGCGATGGCGGCGGATGGGGGATGCTGCGGATCGCTGACGGATGCGAAGATCAGCGACATACAGACATGGGTGAGCGCGGCGGTGACGGATCAACAAACTTGCCTTGATGGGTTGGAGGAGATGGGTTTGGTGGGTGCTGTTGTTGAAGTGAAGAGCATGATGAAGAGTTCCACAGAGTACACTAGTAACAGCTTGGCCATTGTTGCTAATATACGCACCTTGTTACATCAATTCCATATGCCACTCCATTGA 729 0.5391 MGTLEMFKGYSKVEEDHHHLEDQRQQQRHSKICKPLTATFSIFAMVFLTLTIAFALATLIHHVNTESPEEEPLNSAESIRAVCNVTRFPDSCFSAISSSTQNPTDPEAILRLSLRVTVDELSKVASSLRAMASNSKGSALVDCKDQMDDALSRLNDSLSAMAADGGCCGSLTDAKISDIQTWVSAAVTDQQTCLDGLEEMGLVGAVVEVKSMMKSSTEYTSNSLAIVANIRTLLHQFHMPLH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi818g00002 242 CDD PMEI-like_3 81 232 - -
Gabi818g00002 242 SMART PMEI_2 74 226 IPR006501 GO:0004857
Gabi818g00002 242 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 230 IPR035513 -
Gabi818g00002 242 PANTHER PECTINESTERASE 50 228 - -
Gabi818g00002 242 NCBIfam pectinesterase inhibitor domain 50 229 IPR006501 GO:0004857
Gabi818g00002 242 FunFam Pectinesterase 75 231 - -
Gabi818g00002 242 Pfam Plant invertase/pectin methylesterase inhibitor 78 226 IPR006501 GO:0004857
Gabi818g00002 242 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi818g00002 Gabi-Chr818 55341 56289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi818g00002 1 242 Carbohydrate Esterase AT1G53840 37.109 2.22e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi818g00002 - - aprc:113852848 267.7