Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00111 ATGGCTAATTCGTCTTGTTCTAGCTTAATGATTGGTTTGGCCCTCTTTGTCCTCGCATTGGGGAGTGCCAATGCAACACTTTCCACTAACCACTACTACAGTTCTTGTCCAAAACTCCTTGACACTGTGAAATGCACAGTGGAATCAGCCATATCAAAGGAGGCTCGCATGGGTGCTTCCCTCCTGCGTTTGTTCTTCCACGATTGCTTTGTTAACGGATGTGATGGTTCGATTCTACTTGATGACACATCAAGCTTCACAGGGGAGAAGCATGCAAAACCCAACAATAATTCTGCCCGTGGATTCGAAGTGATCGACGCAATCAAGTCAGCAGTTGAAGAAGTGTGCCCAGGTGTGGTCTCCTGCGCTGATATCCTTGCCATCGCTGCCAGAGACTCTGTTAATATCCTTGGAGGCCCAAGTTGGGATGTGAAACTTGGAAGAAGAGACGCTAGGACAGCTAGCTTATCCGCTGCTAACAACGGCATCCCAGCACCCACTTCAAACCTCAACCAACTCATCTCGAGATTCAGTGCTCTTGGACTTTCCACCAACGACTTGGTGGCATTGTCTGGTGGTCATACAATTGGACAGGCAAGATGCACCACTTTTAGAGGCCGCATATACAATGAAACAAACATAGATGGGTCCTTTGCACGCATGAGGCAATCTAGTTGTCCCAGGTCGACAGGGTCAGGGGACAATAACCTGGCACCCCTTGATCTGGAGACACCAACATCATTCGACCACCATTACTTCAAGAACCTCGTTGAGAAAAAAGGGCTCCTCCACTCTGACCAGCAACTCTTCAATGGCGGCTCCACCGACTCCATAGTGAGCGACTACAGCACCAACCCCACCTCCTTTTCCTCTGATTTCGCCACTGCCATGATCAAGATGGGAGATATCAGCCCCCTCACTGGCTCCAACGGAGAGATTAGAAAGAATTGCAGGAGTGTCAACTAA 966 0.4907 MANSSCSSLMIGLALFVLALGSANATLSTNHYYSSCPKLLDTVKCTVESAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKHAKPNNNSARGFEVIDAIKSAVEEVCPGVVSCADILAIAARDSVNILGGPSWDVKLGRRDARTASLSAANNGIPAPTSNLNQLISRFSALGLSTNDLVALSGGHTIGQARCTTFRGRIYNETNIDGSFARMRQSSCPRSTGSGDNNLAPLDLETPTSFDHHYFKNLVEKKGLLHSDQQLFNGGSTDSIVSDYSTNPTSFSSDFATAMIKMGDISPLTGSNGEIRKNCRSVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00111 321 FunFam Peroxidase 30 172 - -
Gabi817g00111 321 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gabi817g00111 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gabi817g00111 321 Gene3D Peroxidase, domain 2 164 300 - -
Gabi817g00111 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 Gene3D - 30 321 - -
Gabi817g00111 321 PANTHER PEROXIDASE 72-RELATED 24 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 SUPERFAMILY Heme-dependent peroxidases 27 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 FunFam Peroxidase 164 300 - -
Gabi817g00111 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi817g00111 321 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00111 Gabi-Chr817 1027331 1030315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00111 25 321 Peroxidase AT5G05340 74.747 1.16e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00111 K00430 - gmx:100803637 542.347