Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00107 ATGGTTTCTATAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTATTACTAACTCTCATGCTCTAAACAAAAGCTCGATCATAATCGATGCATCAAAGTATATCGAAAAGCTAAAGCAAAAAGTAGAAAGACTGAATCAAGAAATAGCCTCTGCGCCTGAAACTTCAAGCGACCGCAATCCCTTGCCGATGGTTTCAGTAGAAACCCTAGAAAAGGGATTTCTTATAAATGTTTTTTCAGCAAAAGGGTGCCCAGGTCTGCTTGTTTCCATATTGGAGGTCTTTGAAGAGATGGGACTTATAGTGCTGGAAGCTAGGGTTTCTTGTACAGACAATTTTCGATTTCAAGCAGTTGGAGGAGAAAATGAAGAACAAGGTGAGACTATTGATGCACAAGTTGTGAAACAAGCAGTGGGACAAGCAATAAAGAACTGGAGCGAAAGTGCTGATCGAGAGTAA 474 0.4093 MVSIEQKRAALHEKLQLLRSITNSHALNKSSIIIDASKYIEKLKQKVERLNQEIASAPETSSDRNPLPMVSVETLEKGFLINVFSAKGCPGLLVSILEVFEEMGLIVLEARVSCTDNFRFQAVGGENEEQGETIDAQVVKQAVGQAIKNWSESADRE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00107 157 Coils Coil 33 60 - -
Gabi817g00107 157 Gene3D - 3 64 IPR036638 GO:0046983
Gabi817g00107 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 57 IPR036638 GO:0046983
Gabi817g00107 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00107 Gabi-Chr817 962304 964009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00107 11 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.378 5.96e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00107 - - tcc:18600910 249.21