Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00103 ATGGCTCATGGCTGTATATCCATCGACGGCATTTATTATACAACACCCAAAATGAAGCTTGCCTCTACGTCCGACAATACCCAAGTTGTTGCCCCTCTCCTCCTACCGCGGGACTGCGAGCACTCCCCGGAAGACCCGAGTCCGCAAAATGGATCCATTACCGGAGCGGTGTTCAACATATCAACCACCATGATCGGTGCGGGAATCATGTCGGTTCCGGCGACCATGAAGGTGCTGGGCTTAATTCCGGGGTTCGTGGTGATTGTGTTGGTGGCAGTGATAACAGATATAACGGTGGAGTTTATGTTAAGGTACACAAGCTCCGGGAAATCCATTACCTATGGGGGCATGGTGGGCGAGTCATTTGGCTCTATAGGATCCCTTGCTGTCAAGATTTGCGTCATCATAACCAATCTTGGTATCCTTATCATCTATTTCATTATTCTTGGAGACGTGCTCTGTGGAAGTGAGTCCAAAGGAACCACACACTTGGGTGTTCTACAAGAGTGGTTTGGCATCTACTGGTGGACCTCTCGCAATTTTGCACTTCTTATAGTTGCTCTCTTAATGCTTCCACTGGTTATGTTACGGCGAGTTGACTCACTCAGGTATAGTTCTGCAATATCAATCCTTCTAGCATTGGTATTTATTGCAATATGCTCATCAATGGCGCTTAATGCATTATGGTCCGGCAAAACTCAATCACCGAGGATACTACCAGATTTCTCTCAAGTCACTGTCCTTCAACTTTTTACTACTGTCCCAGTTTTTGTGACGGGTTTTGGATTCCATGTGAACGTTCATCCAATTAGAGCAGAGCTTGGAAAACCTGCAGACATGTGTTTGGCTGTGCGGATTTCGTTGATAATATGCGTTTTCATTTACTTTGCTATTGGCTTCTTTGGGTACCTATTGTTTGGGGATTCCATCATGCCCGATGTGCTGGTAAACTTTGACCAAAACTCCAATACAAGTGTTGGTCGATTGCTCAATGACATTGTTCGGTTAAGCTATGCACTCCATCTTGCGCTTGTGTTCCCCATTATGAGCTATTCCTTGAGGGCCAACATAGATGAACTAGTATTCTCAAAAAAAAACAAGCCTGCCCTGGCATTAGACACACCAAGATTTGTGTCTCTTACTCTGGCTTTACTAGCCCTCTCATACTTGGTGGCCGTGGCCATCCCAAACATCTGGTATTTTTTTCAGTTTTTGGGATCCACAACCGTTGTTTGTCTATCATTTATATTCCCTGCTGCAATCATTCTAAGGGATATGTATGGCATATCAACCACAAAAGATCAAGTCATGGCAATAGTGGTGATTGTTTTGGCTGTAGTGACAAGCGGAATTGCTATATGGACTAACTTGTATGGTTCAAGTGCTGATCAGCCATAG 1398 0.4471 MAHGCISIDGIYYTTPKMKLASTSDNTQVVAPLLLPRDCEHSPEDPSPQNGSITGAVFNISTTMIGAGIMSVPATMKVLGLIPGFVVIVLVAVITDITVEFMLRYTSSGKSITYGGMVGESFGSIGSLAVKICVIITNLGILIIYFIILGDVLCGSESKGTTHLGVLQEWFGIYWWTSRNFALLIVALLMLPLVMLRRVDSLRYSSAISILLALVFIAICSSMALNALWSGKTQSPRILPDFSQVTVLQLFTTVPVFVTGFGFHVNVHPIRAELGKPADMCLAVRISLIICVFIYFAIGFFGYLLFGDSIMPDVLVNFDQNSNTSVGRLLNDIVRLSYALHLALVFPIMSYSLRANIDELVFSKKNKPALALDTPRFVSLTLALLALSYLVAVAIPNIWYFFQFLGSTTVVCLSFIFPAAIILRDMYGISTTKDQVMAIVVIVLAVVTSGIAIWTNLYGSSADQP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00103 465 Pfam Transmembrane amino acid transporter protein 50 451 IPR013057 -
Gabi817g00103 465 PANTHER AMINO ACID TRANSPORTER 43 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00103 Gabi-Chr817 923084 927458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00103 34 463 Amino Acid or Auxin Permease AAAP Family AT3G56200 53.935 3.20e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00103 - - gmx:100794031 651.744