Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00090 ATGAGAAATGCTTCTCATTGGCACCGTATCTACCACAACCCACGTTACTTTTTCCGGTTGTTTTTCTGCTTGTGGTTTCTTCTTCTCCCAGTGAAGCCAGTGTTGGGTGAAGAGCGTTGGGATGGAGTGGTTGTGACACAGTCAAACTTCTTATCACTTCAAGCATTCAAGCAAGAATTGGTTGATCCCAAAGGCTTCTTGCGAAGCTGGAATGACAGCGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATTAAGTGTGCTCAGGGACAGGTTATTGTAATAGACCTTCCATGGAAAGGGTTGCAGGGGCATATTACTGAGAGGATTGGCCAACTTCAGGGGCTTCGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCTGTCCCTTCAGCATTGGGACTTCTTCTCAATCTAAGAGGGGTTCAACTCTTCAACAATAGGTTAACGGGGTTCATCCCTCCTTCATTAGGTTACTGTCCTTTGCTTCAGTCTTTAGACCTCAGCAACAATATGCTCACGGGGTCAATCCCTGATAGCCTTGGGAACTCCACTAAGCTTTATTGGCTTGACTTGAGCTTCAATTCCTTCTCTGGTCCAATACCAGCTACCCTAACTCGCTTAACCTCTCTTACCTTTCTTTCTCTTCAACACAATAATCTCTCAGGCTCTATCCCTAACTCATGGGGTGGTAGTCAGCTTCAAAATCTGATTCTAGATCATAACTTCTTCACTGGAAGAATTCCTTCTTCATTGGGCAGCTTAAGCGAACTAAAAGAGATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATACCAAATAGAATAGGAAGCCTTTCTAGGCTTGAGAGAGTAGATTTTTCTAATAATGCCTTGAACGGAAGCTTGCCTTCCACTCTCTCTAATTCATCCTCGCTCACTCTGTTGAATGTAGGGAACAACCACCTAAGCAATCAAATCCCAGAAGCTTTAGGCAGCTTCCATAACCTTTCTGTTCTAATTTTGAGCAGAAACCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACATTTCAACGCTTACACAGCTTGATATGTCACTTAATAATCTCAGTGGAGAAATTCCAGTCTCCTTTGACAATCTACGTAATCTTAATTTCTTCAATGTTTCTCATAATAACCTCTCTGGTCCAGTTCCAACCCTGCTCGCCCACAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAGCTCTTCAACCCCATGTCCCTCGCCAGGTCCTGGTGAAGAAGGACAAGGAGTCCTTGCTGCACCTCCTGAAATATCAAAACATCACCATCATAAGAAACTAGGTACCAAAGACATAATTCTCATAGCAGCAGGAGTGCTCCTTGTAGTCATGGTAACAATTTGCTGCATCCTGCTCTTCTGCCTGATCAGAAAAAGAGCAACATCAAATGAAGAGGGTGGTCAGGCCACAGGGAGAGCTGCTACCAGGACAGAAAAAAGAGTCCCTTCCGTTGCCGGTGAAGCTGAAGGGGGTGGTGAAGCTGGTGGTAAACTAGTCCATTTTGATGGACCACTAGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCGGAGATAATGGGAAAGAGCACCTATGGAACAGTGTACAAGGCTACTTTAGAGGATGGAAGCCAAGCTGCAGTGAAACGATTGAGGGAAAAGATCACTAAAAGTCAGAGAGAATTTGAATCCGAAGTTAGTGTTCTAGGGAGAATTCGACATCCAAATCTTTTGGCACTAAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTAGCTTCTTTCCTACATGCTCGTGGGCATGAAACAGCCATTGATTGGCCAACGAGGATGAAAATAGCACAGGGAATGGCTCGTGGCTTGTTTTACCTTCATTCCCATGAGAACATTATACATGGGAACCTTACGTCCAGCAATGTCTTGCTTGATGAGAATACAAATGTTAAAATAGCTGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTGATTGCAACTGCTGGAGCATTGGGATACCGAGCACCTGAGCTTTCAAAGCTTAAGAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGTAAGCCACCTGGTGAGGCTTTGAATGGCGTGGATTTGCCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGTAGAGTTGATGAGAGATGCTTCCACAAATGGCGATGAGTTGCTTAACACGTTGAAGCTTGCTTTGCACTGTGTGGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTCCTCCAGCAGCTAGAAGGGATTAGACCAGACATATCAGCCACTTCTAGTGATGATGGAGCCATCCCTTCCACCAGTGAATAA 2481 0.4405 MRNASHWHRIYHNPRYFFRLFFCLWFLLLPVKPVLGEERWDGVVVTQSNFLSLQAFKQELVDPKGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIDLPWKGLQGHITERIGQLQGLRKLSLHDNQIGGSVPSALGLLLNLRGVQLFNNRLTGFIPPSLGYCPLLQSLDLSNNMLTGSIPDSLGNSTKLYWLDLSFNSFSGPIPATLTRLTSLTFLSLQHNNLSGSIPNSWGGSQLQNLILDHNFFTGRIPSSLGSLSELKEISLSHNQFSGAIPNRIGSLSRLERVDFSNNALNGSLPSTLSNSSSLTLLNVGNNHLSNQIPEALGSFHNLSVLILSRNQFSGHIPQSIGNISTLTQLDMSLNNLSGEIPVSFDNLRNLNFFNVSHNNLSGPVPTLLAHKFNSSSFVGNIQLCGYSSSTPCPSPGPGEEGQGVLAAPPEISKHHHHKKLGTKDIILIAAGVLLVVMVTICCILLFCLIRKRATSNEEGGQATGRAATRTEKRVPSVAGEAEGGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKSQREFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGHETAIDWPTRMKIAQGMARGLFYLHSHENIIHGNLTSSNVLLDENTNVKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDVELMRDASTNGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEGIRPDISATSSDDGAIPSTSE 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00090 826 Gene3D Transferase(Phosphotransferase) domain 1 614 820 - -
Gabi817g00090 826 SUPERFAMILY Protein kinase-like (PK-like) 540 809 IPR011009 -
Gabi817g00090 826 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 234 807 - -
Gabi817g00090 826 FunFam Leucine-rich repeat receptor-like protein kinase 521 612 - -
Gabi817g00090 826 MobiDBLite consensus disorder prediction 487 513 - -
Gabi817g00090 826 MobiDBLite consensus disorder prediction 807 826 - -
Gabi817g00090 826 Gene3D Ribonuclease Inhibitor 204 301 IPR032675 -
Gabi817g00090 826 Gene3D Ribonuclease Inhibitor 48 203 IPR032675 -
Gabi817g00090 826 ProSiteProfiles Protein kinase domain profile. 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00090 826 SUPERFAMILY L domain-like 86 419 - -
Gabi817g00090 826 Gene3D Ribonuclease Inhibitor 303 415 IPR032675 -
Gabi817g00090 826 SMART LRR_typ_2 256 279 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 280 304 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 161 185 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 209 232 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 328 352 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 376 399 IPR003591 -
Gabi817g00090 826 SMART LRR_typ_2 113 137 IPR003591 -
Gabi817g00090 826 FunFam Leucine-rich repeat receptor-like protein kinase 46 203 - -
Gabi817g00090 826 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 231 424 - -
Gabi817g00090 826 CDD STKc_IRAK 542 807 - -
Gabi817g00090 826 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Gabi817g00090 826 Pfam Leucine rich repeat 233 293 IPR001611 GO:0005515
Gabi817g00090 826 Pfam Leucine rich repeat 330 389 IPR001611 GO:0005515
Gabi817g00090 826 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Gabi817g00090 826 Gene3D Phosphorylase Kinase; domain 1 542 613 - -
Gabi817g00090 826 Pfam Leucine rich repeat N-terminal domain 51 87 IPR013210 -
Gabi817g00090 826 FunFam Pollen receptor-like kinase 1 613 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00090 Gabi-Chr817 819074 821675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00090 40 809 Receptor kinase-like Gene Family AT3G51740 64.258 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi817g00090 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00090 - - gmx:100811174 1348.18