Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00083 ATGCCTCTGCCTCAGCTTTTGTTGCATATGAAAGAAGCATACAAGGAAGCCAAGGAGGAGTTCTGCTCACAAATTCGAAGATTTACTGATATTGACAAGCAAACCAACGTTGGCATTAACAGTTATGTATCAATTGGGAGGTTTCTCTATTCTCCGGATGTAAGAAAATCACCACAACTAGGTGGTGCCCTTGAATCATGGCGTGGTTTCTCCCAGAGTATAAGACCTACTCATATGGGATTGTCACTTAACATTGATATGTCATCAATGGCATTCATTGAACCACTACCTGTAATTGAATTTGTTGCTCAAATTTTGGGAAAAGATGTACACTCAAAACCATCGTCAGATGCAGATCATGTCAAGATTAAAAAGGCACTAAGAGGTGTAAAAGTGGATGTTACACACAGAGGAACATTTCGCAGAAAGTACAGTATATCAGGACTGACTTCACAGCCAACAAGGGAGCTTATTTTCCCTCTTGATGACCAAATGGACATGAAATCAATAGTTGATTATTTTCTAGAAATGTATGGATATACACTCCAATTTTCTCATCTACCTTGCCTTCAAGTAGGCAGCCAAAGGAAGGTGAACTATTTGCCTATGGAGGCATACAAGATAGTTGGAGGCCAGAAATTTACAAAAGGACTAAACGAAAAGGAGATAACTTCTCTGCTAAAGGTTTCATGCCAGAGACCCTGTGAACAAGAGACAGACATTTTGCAGACAATTCAACAAAATGACTATGCAAATAATCCCTATGCAAAGGAGTTTGGTATTAGCATAGACAACAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCCTGCTCCATGGTTGAAGTATCATGACACTGGACGAGAGAAAGAATACTTACCACAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTTATAAATGGAGGTAACATAAGATATTGGGCATGTATTAATTTCTCACAAAGTGTACAGGAAAGTACAGCCCGTGGATTTTGCCAACAGTTAGTTAAGATGTGTCAAATCTCTGGCATGGAATTCAATCAGGACCCTGTGATTCCTGTATATTCAGTGAGACCAGATCGAGTAAATAAGGCTTTGAGGTCTGTACATTCTGTTGCTATGGAAAAACTTCATGGGAAAGAGTTAGAGTTGCTGATTGCCATTCTTCCAGACATTAATGGCTCTCTGCATGGTGCTGTCAAAAGAATCTGCGAAACAAATCTGGGGTTGATTTCTCAGTGCTGCCTTACAAAGCATGTATTCAAGATTAATAGACAGTACCTAACAAATGTGGCACTACAAATCAATGTCAAGAAGGAAGGAAGAAACACAGTACTTTTGGATGCTATAAGTTGGAGGATTCCACTGGTTATTGATATACCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAACCTGGAAAGGATTCTTGCCCATCTATTGTTGCTGTTGTAGCATCCCAGGACTGGCGGGAAGTAACAAAGTATGCAGGGTTGGTCTGTGCTCAGCCTCATAGCGAAGAACTCATTGAAGATCTTTTCAAATGTTGGAAAGATCCACAGCGTGGTGTAGTTTATGGTGGTATGATCAGGGAGCTTTTACTCTCATTTAAGAGGGCACCTGGTCAAAGACCATTGCGAATAATCTTTTACAAGGATGGGGTAAGTGACAGTCAGTTCTACCAGGTTTTGCTGTATGCGCTTGATGCCATCCGCAAGGCTTGTGCATCCTTGGAACCTAGTTACCAACCTCCAGTAACATTTGTCGTGGTTCAAAAACGGCATCACACTAGACTCTTCTCAAATAATCCCAATGACAGAAACAACACTAATAAGAGTGGTAATATCTTACCTAGTACTATGGTGGATTCTAAGATATGTAATATTGTTGGAGATGAGGTATCTGTCATTGCACCTAACACTCCATCCCTTTATGAAGCTCATTTCGGGATTCCAATGGCAGGAGCTGTACTGAACACTATTAATATTCGGTTAAATGCATCAACAGTAGCTTTCCTTCTTCGTTATTGTTCAGCAGCAGTTGTAATCGTGGATCAAGAGTTCTTTTCCTTGGCAGAAGAAGCTTTGCAAATCTGGTCTGAGAAAAGCAAAAGCTTTAAGCCTCCAATTTTAATTGTCATTGGTGATGAGAACTGCAAACCTAATGAACTCAGATATGCTTTGGCCAAAGGAGCCATCGAATATGAGAAATTTCTTGAAAGTGATGAGTGGCAGAGCATTGCTTTGGGTTACACATCTGGTACCACTGCTAGTCCTAAGGGCGTGGTATTACACCACCGAGGGGCATATCTAATGTCTCTAAGTGGAGCTCTTATTTGGGGAATGCAGGAAGGTGCTGTGTATCTGTGGACATTACCCATGTTTCTTTGCAATGGCTGGTGCTATACTTGGACACTTGCCGCTTTTTGTGGGACAAACATTTGTCTTCGTCAAGTAACAACAAAGGCAACTGCATTTGGGATGTCATGTATTTTTATCTTTGACCCTGGTATTGTTATAACTTAA 2529 0.4061 MPLPQLLLHMKEAYKEAKEEFCSQIRRFTDIDKQTNVGINSYVSIGRFLYSPDVRKSPQLGGALESWRGFSQSIRPTHMGLSLNIDMSSMAFIEPLPVIEFVAQILGKDVHSKPSSDADHVKIKKALRGVKVDVTHRGTFRRKYSISGLTSQPTRELIFPLDDQMDMKSIVDYFLEMYGYTLQFSHLPCLQVGSQRKVNYLPMEAYKIVGGQKFTKGLNEKEITSLLKVSCQRPCEQETDILQTIQQNDYANNPYAKEFGISIDNKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGGNIRYWACINFSQSVQESTARGFCQQLVKMCQISGMEFNQDPVIPVYSVRPDRVNKALRSVHSVAMEKLHGKELELLIAILPDINGSLHGAVKRICETNLGLISQCCLTKHVFKINRQYLTNVALQINVKKEGRNTVLLDAISWRIPLVIDIPTIIFGADVTHPEPGKDSCPSIVAVVASQDWREVTKYAGLVCAQPHSEELIEDLFKCWKDPQRGVVYGGMIRELLLSFKRAPGQRPLRIIFYKDGVSDSQFYQVLLYALDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNPNDRNNTNKSGNILPSTMVDSKICNIVGDEVSVIAPNTPSLYEAHFGIPMAGAVLNTINIRLNASTVAFLLRYCSAAVVIVDQEFFSLAEEALQIWSEKSKSFKPPILIVIGDENCKPNELRYALAKGAIEYEKFLESDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMQEGAVYLWTLPMFLCNGWCYTWTLAAFCGTNICLRQVTTKATAFGMSCIFIFDPGIVIT 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00083 842 FunFam Protein argonaute-2 89 215 - -
Gabi817g00083 842 Gene3D paz domain 90 214 - -
Gabi817g00083 842 Pfam Piwi domain 385 634 IPR003165 GO:0003676
Gabi817g00083 842 Pfam Argonaute linker 2 domain 238 282 IPR032472 -
Gabi817g00083 842 SUPERFAMILY Ribonuclease H-like 374 631 IPR012337 -
Gabi817g00083 842 Pfam Mid domain of argonaute 293 369 IPR032473 -
Gabi817g00083 842 ProSiteProfiles Piwi domain profile. 384 629 IPR003165 GO:0003676
Gabi817g00083 842 SUPERFAMILY PAZ domain 91 250 IPR036085 GO:0005515
Gabi817g00083 842 Gene3D - 274 447 - -
Gabi817g00083 842 Gene3D - 636 828 IPR042099 -
Gabi817g00083 842 SMART DUF1785_2 43 95 IPR014811 -
Gabi817g00083 842 Pfam Argonaute linker 1 domain 44 93 IPR014811 -
Gabi817g00083 842 CDD PAZ_argonaute_like 95 209 - -
Gabi817g00083 842 SMART Piwi_a_2 384 680 IPR003165 GO:0003676
Gabi817g00083 842 ProSiteProfiles PAZ domain profile. 96 210 IPR003100 GO:0005515
Gabi817g00083 842 FunFam Argonaute 10 274 447 - -
Gabi817g00083 842 Pfam AMP-binding enzyme 632 822 IPR000873 -
Gabi817g00083 842 Pfam PAZ domain 102 222 IPR003100 GO:0005515
Gabi817g00083 842 SUPERFAMILY Acetyl-CoA synthetase-like 632 820 - -
Gabi817g00083 842 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 29 629 - -
Gabi817g00083 842 Gene3D - 454 635 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00083 Gabi-Chr817 754393 756921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00083 37 629 Eukaryotic Initiation Factors Gene Family AT5G43810 70.995 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00083 K11593 - gmx:100810235 1044.65