Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00079 ATGGGTGGGAATTCCCCGTGTGCCTCATGCAAGCTGCTGAGACGCCGATGCACAAAAGATTGCACCTTTGCTCCTTATTTCCCTTCTGATGAACCCCAAAAGTTCGCCATAGTTCACAAGGTTTTTGGAGCTAGCAACGTTAGCAAAATGTTGCAGGAACTTCCGGTTCATCAGAGAGCAGATGCAGTGAGCAGTTTAGTGTATGAGGCAAATGCAAGAGTCCGTGACCCAGTGTATGGTTGTGTTGGAGCTATATCCTACTTGCAAAATCAGGTTTCTGAGCTTCAAATGCAACTTGCAGTTGCTCAAGCAGAGTTACTCTGCATCCCGATGGAATATGAACCAGTGATACCAACCCCAGAAATTTACCCTGATCAGAAATCTTACTTTCTCCAAAGTGATCTCCCTCAATATCTCAACTATGGCACTTCTAGCAATGTAATTCATGACTCTCTCAAGAGAGAGAGCATTTTTGGACATGACATGGTTTCTTGA 495 0.4444 MGGNSPCASCKLLRRRCTKDCTFAPYFPSDEPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAELLCIPMEYEPVIPTPEIYPDQKSYFLQSDLPQYLNYGTSSNVIHDSLKRESIFGHDMVS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00079 164 Coils Coil 85 105 - -
Gabi817g00079 164 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Gabi817g00079 164 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Gabi817g00079 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00079 Gabi-Chr817 706031 706876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00079 3 131 AS2 family AT2G30130 78.195 2.29e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi817g00079 LOB 6.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00079 - - lang:109360574 296.975