Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00071 ATGAGCAAGAACAGGAAGCTCCATCGGCCAAGGGATCTTTGTGGAGCTTTGCGTTTTGTGGCGGTGTGCTTGTTGTTTCAGAACTTGGGTTTGTGCAGTTCTTTAAATGAAGAAGGTAACGCTCTTTTGAAGTTGAAGCAGAGAATAACGAGTGACCCTTTTGGTGCTTTGTCAAATTGGATTGATGATGAAGCTGCTTCTGACCCATGCAATTGGTTCGGAGTTGAGTGCTCGGATGGAAGAGTTGTGGTCTTGAATTTGAAAGATCTCTGCCTTGGAGGAACTTTGGCACCTGAGCTTGTGAATCTTATTCACATAAAGTCTATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGAATTGTAGATTTGAAAGAATTGGAGATTTTGGATTTGGGATACAACAATTTCAGTGGACATCTACCTGCTGCTCTTGGCAGTATTATCTCACTAGCAATCCTTTTGCTGGACAACAATGAGTTTCTTGTTGGTTTCTCTCCCGAAATCAATGAACTGAAGATGATTTCTGAATGTCAAGTAGATGAAAACCAGCTAACTAATGCAGCTAAGATGCCAGGATGTACTGGAACATGGCATGTTGGTCAAAACAAAGGAACTCGGAGCCTGCTGCAAAATTATAATCTTGATTTTCAAGACCATCGTTATCACGAGGCTAATCCACATCTCCATAGCCCTTCTCCTTCAGCTTCCCCTAGTCAAAATACTTTTGATTCTCTTCCTACCCTGTCACCAGACTCTGAAGCACCATCTAAAAGCTCCTCATCAAAGAATGATCAAGTCCCTATTTTGGCCGGAGTTATAGGTGGTGCTGTATTTCTTCTTATTTCATTCATTGGCATATATCTTTGTAAAACCAACAAGGTAGCTATTGACATACCATGGGCCACAGGAATAAGTGGACAGCTTCAGAAGGCGTTTGTGACTGGGATGCCGAAGCTAAAGAGATCAGAGCTTGAAGCTGCATGTGAAGATTTTAGTAATGTAATTCGTACTTCACCCATTGGTACAATGTACAAAGGGACTTTGTCTAGTGGCATTGAAATAGCTGTAGCTTCAGTTTCGGTTACATCATCCAAGAATTGGTCAAAGACTTTAGAAGCTCAATTTTGTAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATATTGTGAAGAAAACGAGCCTTTCACCAGAATGTTGGTTTTCGAATATGCCCCAAACGGAACACTGTTTGAGCATTTACACATAAAAGAAGCTGAACACTTGGACTGGGGAACAAGACTTAGAATTGCAATGGGAATGGCTCACTGCCTGCAACATATGCACAAGTTGGACCCTCCTATGGCCCTTATCAACCTGAATTCTTCAGCTGTCCACCTGACTGATGACTATGCTGCCAAAATCTCGGATTTGAGTTGCCCGAAAGAAATAGCTTCAGCTGAGACAAAAGCTGAGGGTAGAGAACACATTGACATGCCATTAGCAAGTCCACAAAGTAATGTTTACAACTTTGGTGTTTTATTATTTGAAATCGTTACTGGTAGGCTCCCTTATTCAGTGGATAATGGGTCACTTGAAAACTGGGCATCGCACTATTTACAAGGGGACCAGCCCCTCAAAGAAATGGTGGATCCAATTCTAGCATATTACCAAGAAGATCAGCTGGAACAAGTGGCTGAATTGATTAAATCTTGTGTCCATCCTGATTCAGAGCAGAGACCAACAATGAAAGAAGCCAGTGTGAGATTGAGAGAAATAACAAAGATAACACCTGAATTAGCAGTTCCTAAACTTTCTCCACTTTGGTGGGCAGAGGTTGAGATTTCTTCTGCAGAAGTACGCTGA 1878 0.4148 MSKNRKLHRPRDLCGALRFVAVCLLFQNLGLCSSLNEEGNALLKLKQRITSDPFGALSNWIDDEAASDPCNWFGVECSDGRVVVLNLKDLCLGGTLAPELVNLIHIKSIILRNNSFSGTIPEGIVDLKELEILDLGYNNFSGHLPAALGSIISLAILLLDNNEFLVGFSPEINELKMISECQVDENQLTNAAKMPGCTGTWHVGQNKGTRSLLQNYNLDFQDHRYHEANPHLHSPSPSASPSQNTFDSLPTLSPDSEAPSKSSSSKNDQVPILAGVIGGAVFLLISFIGIYLCKTNKVAIDIPWATGISGQLQKAFVTGMPKLKRSELEAACEDFSNVIRTSPIGTMYKGTLSSGIEIAVASVSVTSSKNWSKTLEAQFCKKIDTLSKVNHKNFVNLIGYCEENEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRIAMGMAHCLQHMHKLDPPMALINLNSSAVHLTDDYAAKISDLSCPKEIASAETKAEGREHIDMPLASPQSNVYNFGVLLFEIVTGRLPYSVDNGSLENWASHYLQGDQPLKEMVDPILAYYQEDQLEQVAELIKSCVHPDSEQRPTMKEASVRLREITKITPELAVPKLSPLWWAEVEISSAEVR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00071 625 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gabi817g00071 625 SUPERFAMILY Protein kinase-like (PK-like) 316 592 IPR011009 -
Gabi817g00071 625 Gene3D Ribonuclease Inhibitor 34 209 IPR032675 -
Gabi817g00071 625 MobiDBLite consensus disorder prediction 233 267 - -
Gabi817g00071 625 PANTHER PROTEIN MALE DISCOVERER 2 16 622 - -
Gabi817g00071 625 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Gabi817g00071 625 MobiDBLite consensus disorder prediction 227 267 - -
Gabi817g00071 625 ProSiteProfiles Protein kinase domain profile. 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00071 625 SUPERFAMILY L domain-like 41 191 - -
Gabi817g00071 625 FunFam Inactive receptor-like serine/threonine-protein kinase 307 415 - -
Gabi817g00071 625 Gene3D Transferase(Phosphotransferase) domain 1 416 605 - -
Gabi817g00071 625 FunFam Nuclear pore complex protein NUP107 35 194 - -
Gabi817g00071 625 Pfam Protein tyrosine and serine/threonine kinase 344 590 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00071 Gabi-Chr817 636837 640956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00071 22 596 Receptor kinase-like Gene Family AT5G16000 25.785 2.71e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gabi817g00071 PK_Tyr_Ser-Thr 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00071 - - gmx:100820416 905.975